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ekInstitute of Pharmacology (J.B., P.A.) and Institute of Medical Chemistry and Biochemistry (E.A.), Faculty of Medicine, Palacky University, Olomouc; and National Institute of Public Health, Prague (P.S.), Czech Republic
(Received December 17, 2004; accepted March 16, 2005)
| Abstract |
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Pig and minipig liver microsomal P450 enzymes have been studied in more detail recently. P450 enzymes were shown to be involved in metabolism of veterinary drugs (Monshouwer et al., 1998
). Moreover, their properties are intensively studied since P450 activities belong to important functional characteristics of minipig or pig livers (Anzenbacher et al., 1998
; Skaanild and Friis, 1999
; Soucek et al., 2001
) Myers et al. (2001
) have investigated the properties of the market weight swine P450 enzymes in liver microsomes and in the S10 fraction by Western blot; also, enzyme activities specific for individual P450 enzymes have been determined in subcellular preparations. Interest in pig or minipig hepatocytes and P450s increased over the last few years since they seem to be suitable models in experimental pharmacology (Václavíková et al., 2004
) and, moreover, pig hepatocytes are possibly intended also for xenotherapy or for construction of bioartificial liver supporting devices (Desille et al., 1999
; Donato et al., 1999
; Couzin, 2002
).
To date, only one successful attempt to obtain partially purified minipig liver microsomal drug-metabolizing P450 enzymes has been published. Soucek et al. (2001
) confirmed that the minipig CYP3A (assigned as CYP3A29; Protein Data Bank Accession Number AF424780
[GenBank]
) effectively converts prototypic human CYP3A4 substrate nifedipine to the respective metabolite and that the minipig CYP2A enzyme metabolizes coumarin, a characteristic substrate of the human CYP2A6. To get more detailed information on individual P450 enzymes from pig or minipig, purified CYP2E1 has been isolated from minipig liver microsomes for the first time, and its structural and enzymological characteristics are described and compared with properties of the human orthologous form.
| Materials and Methods |
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Purification of Minipig CYP2E1. Minipig microsomes were obtained from untreated minipig livers (Brno white variety of Goettingen minipigs; Research Institute of Veterinary Medicine, Brno, Czech Republic; 25-30 kg body weight, male castrates, n = 5, age 6 months; approved by local and national ethical commissions) by a standard procedure (Lake, 1990
). Microsomal fraction was solubilized by cholate and applied onto the octylamino Sepharose CL-4B column. The isolation method generally followed the one described earlier (Soucek et al., 2001
). The last peak eluted from the octylamino Sepharose column [eluted with buffer (pH 7.25) containing 0.1 M K-phosphate, 1 mM EDTA, 20% (v/v) glycerol, 0.33% Na-cholate, and 0.06% (v/v) Triton N-101) contained CYP2E1 enzyme together with other P450 forms. CYP2E1 was obtained by repeated chromatography on a hydroxylapatite column equilibrated with buffer (pH 7.4) of the following composition: 5 mM K-phosphate, 0.05 mM EDTA, 20% (v/v) glycerol. Elution of CYP2E1 was achieved by a linear gradient of K-phosphate (10 mM to 300 mM) in the equilibration buffer with 0.3% Triton N-101. As a rule, this procedure had to be repeated twice to get electrophoretically pure CYP2E1 protein with specific content typically over 12 nmol P450/mg protein. The course of purification has been followed by electrophoresis (Mini Protean apparatus; Bio-Rad) and Western blotting using the rat anti-CYP2E1 IgG.
Minipig CYP2E1 cDNA Cloning and Sequencing. Total RNA from minipig liver was isolated by TRIzol according to the procedure supplied by the producer (Invitrogen, Paisley, UK). RNA quality and quantity were assessed by UV-visible spectrophotometry and agarose gel electrophoresis. cDNA was then synthesized using 1 µg of total RNA with the help of a kit purchased from MBI Fermentas (Vilnius, Lithuania). Minipig cDNA was amplified by PCR with forward, 5'-catatggctgctttaggtattactgttgctttattagtgtggttg-3' and reverse, 5'-gtcgactcagtgatggtgatggtgatgcacttgtgagcgggg-3' primers designed using the known pig CYP2E1 sequence (GenBank Accession Number AB052259
[GenBank]
). The first 11 codons of forward primer were changed (the only primary structure change created was the second amino acid to Ala) to prevent unfavorable secondary structure formation during subsequent protein expression trials, and the reverse primer contained a 6-His tag sequence for facile purification of expressed protein. Conditions for PCR amplification in a GeneAmp 9700 thermocycler (Applied Biosystems, Foster City, CA) were 3 min of denaturation at 94°C, 10 cycles of 30 s at 94°C, touchdown annealing for 30 s at 60°C, gradually decreasing to 50°C, 2 min at 72°C followed by 25 cycles of 30 s at 94°C, 30 s at 65°C, 2 min at 72°C with 1.5 mM MgCl2 in the general reaction mixture. The resulting PCR product was further amplified in nested PCR containing forward, 5'-GGGGACAAGTTTGTACAAAAAAGCAGGCTaccatatggctgctttaggtatt-3' and reverse, 5'-GGGGACCACTTTGTACAAGAAAGCTGGGTagtcgactcagtgatg-3' primers. Both primers carried a sequence compatible with the specific recombination sites of the Gateway system (sequences in capital letters) for direct cloning and expression in Escherichia coli (Invitrogen). Forward primer also contained the NdeI restriction site and reverse primer, the SalI restriction site (both positions underlined) for subcloning into expression vector pCW' previously used for expression of human P450s (Sandhu et al., 1993
). Conditions of PCR cycling were 3 min of denaturation at 94°C, 10 cycles of 30 s at 94°C, touchdown annealing for 30s at 60°C, gradually decreasing to 50°C, 2 min at 72°C followed by 25 cycles of 30 s at 94°C, 2 min 30 s at 72°C with 2.5 mM MgCl2 in the general reaction mix. For both PCRs, Platinum Pfx polymerase with proofreading activity was used (Invitrogen). Minipig CYP2E1 coding sequence was then cloned into pDONR201 plasmid of the Gateway according to the protocol supplied with the product (Invitrogen). After restriction analysis by NdeI and SalI (New England Biolabs, Beverly, MA), a clone of the expected length of approximately 1500 base pairs was subcloned into pCW' vector processed with the same enzymes.
For ligation, T4 DNA ligase (New England Biolabs) and, for transformation, Maximum Efficiency DH5
E. coli Competent Cells (Invitrogen) were used following the directions suggested by the producers. For DNA sequencing, a fragment bearing the CYP2E1 clone with adjacent pCW' sequences was amplified using forward, 5'-atcgatgcttaggaggtcat-3' and reverse, 5'-aggccctttcgtcttcaa-3' primers and cycling conditions: 3 min of denaturation at 94°C, 10 cycles of 30 s at 94°C, touchdown annealing for 30 s at 60°C, gradually decreasing to 50°C, 2 min at 72°C followed by 25 cycles of 30 s at 94°C, 30 s at 55°C, 2 min at 72°C with 1.5 mM MgCl2 in the general reaction mixture. Product was then purified from 1% agarose gel by the Perfectprep Gel Cleanup Kit (Eppendorf, Hamburg, Germany) and processed for sequencing using BigDye Terminator Kit v3.1 (Applied Biosystems) according to the manufacturer's recommendations. Primers used for sequencing PCR were as follows: 5'-atcgatgcttaggaggtcat-3' (pCWF), 5'-gaaacagggcaatgagcag-3' (PigCYP2Eseq1), 5'-cgtggccgacatgttctt-3' (PigCYP2Eseq2), 5'-cctcagacaggtcttgtcat-3' (PigCYP2Eseq3), 5'-gttgcttcatgtggcaggt-3' (PigCYP2Eseq4), 5'-aggccctttcgtcttcaa-3' (pCWR). Sequence analysis was carried out on ABI Prism 310 Genetic Analyzer (Applied Biosystems) equipped with 310 Data Collection Software, DNA Sequencing Analysis software (both Applied Biosystems), and the Lasergene program for processing of DNA sequence data of DNASTAR (Madison, WI). The sequence was then analyzed by the BLAST program (available at ncbi.nlm.nih.gov/blast) and compared with human and pig CYP2E1 sequences retrieved from GenBank, where it was submitted as minipig CYP2E1 with Accession Number AY581116
[GenBank]
.
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| Results |
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To confirm the identity of this enzyme, primary structure has been determined. Since the preliminary N-terminal sequencing experiments have confirmed the identity of the published pig (GenBank Accession No AB000885 [GenBank] ) and minipig CYP2E1 N-terminal sequences, it was possible to continue in obtaining the cDNA clone using the primers derived from the data for the pig enzyme. Sequencing of the cDNA has yielded a result published in GenBank (Accession Number AY581116 [GenBank] ).
The primary structures of minipig and pig CYP2E1 are identical with one exception: in position 346, there is an aspartic acid residue in the minipig enzyme contrary to valine in the pig protein. Interestingly, this minor change makes the minipig enzyme more similar to the human protein because the corresponding amino acid residue in the human protein is the glutamic acid. The pig or minipig protein is composed of 496 amino acid residues; the human enzyme is two residues shorter. The minipig (or pig) CYP2E1 exhibits 79.6% primary sequence identity with the human counterpart. The most remarkable difference in the primary structure of (mini)pig and human CYP2E1 is located close to the substrate recognition site region I (Gotoh, 1992
). Here, two basic amino acids (His 92 and Asn 95) are present in mini(pig) CYP2E1 instead of two aspartic acid residues. Similarly, at the beginning of the F helix (and of the substrate recognition site 2), there is a basic lysine residue in the minipig and pig enzyme (Lys 194), whereas a glutamic acid residue is present in the human CYP2E1. The differences in the primary structure of the (mini)pig enzyme do not include the key amino acid residues predicted to interact with a prototypic substrate, chlorzoxazone, in the substrate binding site of human CYP2E1, according to Park and Harris (2003
). For p-nitrophenol (another CYP2E1 substrate) bound in the active site of a human CYP2E1 model (Park and Harris, 2003
), the respective amino acid changes are merely conservative (V364L, P213G, G479A). Also, the model of the CYP2E1 active site constructed on the basis of CYP2C5 (Lewis et al., 2003
) exhibits the same amino acid residues in the active site in the human and minipig CYP2E1 enzyme.
Enzyme Activities. The relatively high degree of homology between the primary structure of human CYP2E1 and orthologous enzymes from other mammalian species is reflected in the similarity, also, in substrate specificity, although some interspecies differences exist (e.g., in metabolism of butadiene) (Lewis et al., 1997
). We have investigated in detail the enzyme kinetics of chlorzoxazone 6-hydroxylation and of p-nitrophenol hydroxylation in minipig liver microsomal fraction as well as in the reconstituted system with CYP2E1 and P450 reductase from minipig. Human liver microsomal samples and the reconstituted system with human P4502E1 and P450 reductase were used for comparison. Inhibition of CYP2E1 activities by diethyldithiocarbamate, a typical inhibitor of CYP2E1 of human origin as well as of other species (Court et al., 1997
), was also investigated.
Results obtained with both prototypic substrates are displayed in the tables. In Table 1, data for enzyme kinetics of chlorzoxazone hydroxylation in liver microsomal fraction and in reconstituted systems of both species (human and minipig) are shown. Data obtained with another substrate, p-nitrophenol, are displayed in Table 2. The KM values for both substrates in the microsomal fraction and in the reconstituted system indicate lower affinity of the minipig enzyme; this is apparently true, also, when the Vmax/KM ratio (often taken as a measure of enzyme specificity) is considered. With the exception of the Vmax for p-nitrophenol hydroxylation in the system reconstituted with minipig CYP2E1, data for minipig CYP2E1 show the differences less than 1 order of magnitude (approximately 4 times higher KM and 4 times lower Vmax) when compared with those for the respective human counterparts. The differences observed may be ascribed to changes in the polarity (or even reversals in the polarity) of amino acid residues in the minipig enzyme observed in the vicinity of the "substrate recognition sites" (see the preceding paragraph). However, the data conclusively document the ability of minipig enzyme to metabolize chlorzoxazone as well as p-nitrophenol at rates comparable to the human CYP2E1.
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Inhibition of CYP2E1 activities by diethyldithiocarbamate, although not strictly specific to this enzyme in humans as well as in other species (Bogaards et al., 2000
; Sai et al., 2000
), is another commonly used probe of similarity of the human and minipig enzyme. In this work, diethyldithiocarbamate has been shown to inhibit chlorzoxazone 6-hydroxylation in both human and minipig microsomes (with Ki values of 21 and 38 µM, respectively) and reconstituted systems (Ki values of 7 µM for human CYP2E1 and 20 µM for the minipig enzyme). Although the Ki values of the respective human and minipig systems do not differ more than 3 times, the results for the reconstituted systems with only CYP2E1 present may indicate lower specificity of minipig CYP2E1 for this inhibitor.
| Discussion |
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Comparison of CYP2E1 of Minipig and of Other Species. CYP2E1 is one of the most conserved P450 enzymes according to the primary structure, exhibiting nearly 80% sequence identity across species (Guengerich, 1997
). High sequence similarity corresponds to similar catalytic properties of CYP2E1 enzymes of various origins (Chauret et al., 1997
; Court et al., 1997
; Bogaards et al., 2000
; Zuber et al., 2002
). Comparison of catalytic rates is, however, difficult, since the enzyme velocity is often expressed relative to protein instead of to the more specific P450 content. Literature data seem to indicate a species-conserved mechanism for oxidative biotransformation by CYP2E1 (Court et al., 1997
). In this respect, minipig is apparently not an exception. In our hands, the KM values for 6-hydroxylation of chlorzoxazone in liver microsomal fraction ranged from 40 µM (human) to 201 µM (pig), and for p-nitrophenol hydroxylation from 30 µM (dog) to 121 µM (minipig) (Anzenbacherova et al., 2005
). However, molecular mechanisms of induction of CYP2E1 in various species may differ; e.g., ß-naphthoflavone, a prototypical inducer of CYP1A, also has been shown to induce the CYP2E1 form in the dog (Jayyosi et al., 1996
). On the other hand, the CYP2E1 enzyme activities seem to be comparable in most of the species used in experimental pharmacology and toxicology, hence allowing for successful modeling of drug metabolism by CYP2E1 in humans.
| Footnotes |
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Part of the results was presented at the 13th International Conference, Cytochromes P450, Biochemistry, Biophysics and Drug Metabolism, Prague, Czech Republic, June 29-July 3, 2003.
Article, publication date, and citation information can be found at http://dmd.aspetjournals.org.
ABBREVIATIONS: P450, cytochrome P450; PCR, polymerase chain reaction.
Address correspondence to: Dr. Pavel Anzenbacher, Institute of Pharmacology, Faculty of Medicine, Palacky University, Hnevotinska 3, CZ-775 15 Olomouc, Czech Republic. E-mail anzen{at}tunw.upol.cz
| References |
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K, Svoboda Z, and Kvetina J (1998) Presence and activity of cytochrome P450 isoforms in minipig liver microsomes. Comparison with human samples. Drug Metab Dispos 26: 90-93.
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