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Drug Metabolism and Disposition Fast Forward
First published on January 28, 2008; DOI: 10.1124/dmd.107.016824


0090-9556/08/3604-745-752$20.00
DMD 36:745-752, 2008

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Metabolism of 2-Amino-1-methyl-6-phenylimidazo[4,5-b]pyridine (PhIP) by Human CYP1B1 Genetic Variants

Jing-Fen Han, Xiao-Yang He, Jason S. Herrington, Lori A. White, Jun-Feng Zhang, and Jun-Yan Hong

School of Public Health/Environmental and Occupational Health Sciences Institute, University of Medicine and Dentistry of New Jersey, Piscataway, New Jersey (J.-F.H., X.-Y.H., J.S.H., J.-F.Z., J.-Y.H.); Department of Biochemistry and Microbiology, Rutgers University, New Brunswick, New Jersey (L.A.W.)

(Received May 23, 2007; Accepted January 23, 2008)


    Abstract
 Top
 Abstract
 Materials and Methods
 Results
 Discussion
 References
 
Human cytochrome P450 1B1 (CYP1B1) plays a critical role in the metabolic activation of a variety of procarcinogens, including 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine (PhIP). The existence of human CYP1B1 missense genetic variants has been demonstrated, but their activities in metabolizing PhIP are unknown. In this study, we expressed 15 naturally occurring CYP1B1 variants (with either single or multiple amino acid substitutions) and determined their activity changes in metabolizing PhIP to its two major metabolites, 2-hydroxyamino-PhIP and 4'-hydroxy-PhIP. Although the PhIP-metabolizing activities of four variants (Ala119Ser, Pro379Leu, Ala443Gly, Arg48Gly/Leu432Val) were comparable with that of the expressed wild-type CYP1B1, five variants (Trp57Cys, Gly61Glu, Arg48Gly/Ala119Ser, Arg48Gly/Ala119Ser/Leu432Val, Arg48Gly/Ala119Ser/Leu432Val/Ala443Gly) exhibited more than 2-fold decrease in activity and a reduction in the catalytic efficiency (Vmax/Km) for both N- and 4-hydroxylation of PhIP. Six variants (Gly365Trp, Glu387Lys, Arg390His, Pro437Leu, Asn453Ser, Arg469Trp) showed little activity in PhIP metabolism, but the molecular mechanisms involved are apparently different. The microsomal CYP1B1 protein level was significantly decreased for the Trp365, Lys387, and His390 variants and was not detectable for the Ser453 variant. In contrast, there was no difference between the Trp469 variant and the wild-type in the microsomal CYP1B1 protein level and P450 content but the Trp469 variant totally lost its metabolic activity toward PhIP. The Leu437 variant also had a substantial amount of CYP1B1 protein in the microsomes, but there was a lack of detectable P450 peak and activity. Our results should be useful in selecting appropriate CYP1B1 variants as cancer susceptibility biomarkers for human population studies related to PhIP exposure.


The estimated daily exposure of an individual to heterocyclic amines (HCAs) ranges from nanograms to a few micrograms (Augustsson et al., 1999Go). 2-Amino-1-methyl-6-phenylimidazo[4,5-b]pyridine (PhIP) is the most mass abundant HCA formed in meat and fish during high-temperature cooking as a result of the pyrolysis of amino acids and proteins (Sugimura and Sato, 1983Go). Tobacco smoke is another major source of PhIP (Hecht, 2002Go). PhIP has been found in the urine of healthy volunteers eating a normal diet (Ushiyama et al., 1991Go), and PhIP-related DNA adducts have been detected in the urine of smokers (Peluso et al., 1991Go). These results suggest that humans are ubiquitously exposed to PhIP. PhIP is mutagenic in bacterial and mammalian cells (Edwards et al., 1994Go; Hammons et al., 1997Go). It induces colon, mammary gland, and prostate tumors in rats and T-cell and B-cell lymphoma in mice (Malfatti et al., 1999Go; Guengerich 2000Go; Williams et al., 2000Go; Ochiai et al., 2002Go; Nakagama et al., 2005Go). Epidemiological studies suggest that colon cancer risk is increased in persons who consume high levels of mutagens in cooked meat (Gunter et al., 2005Go). The National Toxicology Program concludes that PhIP is "reasonably anticipated to be a human carcinogen" (http://ntp.niehs.nih.gov/ntp/roc/eleventh/reason.pdf).

Like most environmental carcinogens, PhIP requires metabolic activation to exert its carcinogenic effects. The metabolism of PhIP leads to the formation of two major metabolites: 2-hydroxyamino-PhIP (N2-OH-PhIP) and 4'-hydroxy-PhIP (4'-OH-PhIP) (Shirai et al., 1997Go; King et al., 1999Go) (Fig. 1). N2-OH-PhIP is highly mutagenic in both bacterial and mammalian cells, and its N-acetylated and -sulfated conjugates can form DNA adducts. In contrast, 4'-OH-PhIP is considered to be noncarcinogenic and is eventually excreted through urine after its conjugation with glucuronide or sulfate (Crofts et al., 1997Go). The metabolic activation of PhIP (i.e., N-hydroxylation) is primarily catalyzed by the enzymes belonging to the cytochrome P450 (P450) 1 family, including CYP1B1 (Crofts et al., 1997Go). Human CYP1B1 is constitutively expressed in many extrahepatic tissues and often overexpressed in a variety of human cancers (Murray et al., 1997Go). In addition to PhIP, it catalyzes the activation of some other environmental carcinogens including arylarenes, nitroarenes, arylamines, and polycyclic aromatic hydrocarbons (Shimada et al., 1997Go). Recently, the existence of the genetic variants of human CYP1B1 has been demonstrated (Stoilov et al., 1998Go; McLellan et al., 2000Go; Aklillu et al., 2002Go; Tanaka et al., 2002Go). Functional characterization of several CYP1B1 missense variants has been conducted with carcinogen substrates estradiol, benzo[{alpha}]pyrene, and 7,12-dimethylbenz[{alpha}]anthracene (Li et al., 2000Go; Shimada et al., 2001Go; Aklillu et al., 2002Go; Aklillu et al., 2005Go). However, the impact of these and other reported CYP1B1 missense variations on PhIP metabolism is yet unknown. It is important to emphasize that an alteration in catalytic function, induced by amino acid substitution, of a particular enzyme could be substrate-dependent. For example, while in comparison with the Val432 form of CYP1B1, the Leu432 form was reported to have a 3-fold increase in the Km value for estradiol hydroxylation but little effect on benzo[{alpha}]pyrene epoxidation (Li et al., 2000Go).


Figure 1
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FIG. 1. Metabolic pathways of PhIP and its two major metabolites.

 

In the present study, we used a heterologous system to express a total of 15 naturally occurring CYP1B1 variant proteins (with either single or multiple amino acid substitutions) (Table 1) and compared them with the wild-type CYP1B1 protein in metabolizing PhIP to its major metabolites, N2-OH-PhIP and 4'-OH-PhIP. Our results are expected to provide direct evidence for the functional significance of these genetic variations in CYP1B1-mediated PhIP metabolism.


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TABLE 1 Amino acid changes and distribution frequencies of the reported 15 CYP1B1 missense variants

 


    Materials and Methods
 Top
 Abstract
 Materials and Methods
 Results
 Discussion
 References
 
Materials. PhIP and N2-OH-PhIP were purchased from Toronto Research Chemicals (Toronto, ON, Canada). For standard validation, we also obtained N2-OH-PhIP as a gift from NCI Chemical Carcinogen Repository Midwest Research Institute (Kansas, MI). 4'-OH-PhIP was a generous gift from Dr. K. S. Kulp and Dr. M. G. Knize (Lawrence Livermore National Laboratory, Livermore, CA). Glucose 6-phosphate, glucose-6-phosphate dehydrogenase, NADP+, {delta}-aminolevulinic acid, ferric citrate, and HPLC grade methanol were purchased from Sigma-Aldrich (St. Louis, MO). Bac-to-Bac baculovirus expression system (including pFastbac1 expression vector) and Grace insect cell culture medium were obtained from Invitrogen (Carlsbad, CA). NADPH-P450 oxidoreductase was purified from rat liver microsomes as described previously (Yasukochi and Masters, 1976Go). A polyclonal rabbit anti-human CYP1B1 antibody was obtained from Gentest Corp. (Boston, MA). Goat anti-rabbit IgG horseradish peroxidase conjugate was obtained from Bio-Rad (Hercules, CA). The ECL-enhanced chemiluminescence reagents for immunoblotting detection were obtained from Amersham Biosciences Inc. (Piscataway, NJ). KOD Hot Start DNA Polymerase was obtained from Novagen (Madison, WI).

Construction of CYP1B1 Variant cDNAs. The wild-type human CYP1B1 cDNA (NM_000104 [GenBank] ) was used as a template to generate the variant cDNAs by site-directed mutagenesis as described previously (Han et al., 2006Go). The polymerase chain reaction primer sequences for the mutagenesis are shown in Table 2. Additional rounds of mutagenesis were conducted to generate the variant cDNAs containing more than one nucleotide variations. All the variant cDNAs were sequenced after mutagenesis to ensure there were no extra mutations produced during polymerase chain reaction amplification process.


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TABLE 2 Sequences of the primers used for site-directed mutagenesis

The codons to be mutated are underlined with the altered single nucleotides in bold.

 

Heterologous Expression and Microsome Preparation. A Bac-to-Bac baculovirus expression system was used for the expression of CYP1B1 proteins. Wild-type and variant cDNAs were individually subcloned into the expression vector pFASTbac1. The reconstructed bacmid DNAs obtained after DNA transpositions in DH10BAC cells were transfected into Sf9 cells to obtain the recombinant baculovirus particles. Sf9 cells were subsequently infected in large scale with the virus particles for the production of the CYP1B1 proteins. {delta}-Aminolevulinic acid and ferric citrate stock solutions (100 mM each, dissolved in Grace medium) were added to the culture medium for a final concentration of 100 µM. The infected Sf9 cells were harvested 72 h after infection and resuspended in phosphate-buffered saline containing 5 mM imidazole, 20% glycerol, and 1 mM freshly added phenylmethylsulphonyl fluoride. Microsomes were prepared from the cells by sonication and differential centrifugation as previously described (Hong et al., 1999Go). The microsome preparations were stored at –70°C before use. Protein concentrations were determined by the protein assay reagents from Bio-Rad.

Immunoblot Analysis and P450 Content Determination. Microsomal proteins (1 µg) were loaded onto 10% SDS-polyacrylamide gels for electrophoresis and transferred to a nitrocellulose membrane. The membrane was blocked for 1 h using 5% (w/v) evaporated milk in Tris-buffered saline containing 0.0005% (v/v) Tween 20. The membrane was probed with a CYP1B1-specific polyclonal antibody (1:3300 dilution) as the primary antibody for 1 h and followed by goat anti-rabbit IgG, conjugated with horseradish peroxidase (1:5000 dilution), as the secondary antibody for 1 h. The immunoblot was visualized by ECL reagents according to the manufacture's protocol (Amersham Biosciences Inc.). Microsomal P450 content was determined by reduced CO-difference spectrum using a UV/visible spectrophotometer as previously described (He et al., 2004Go).

PhIP Metabolism and Kinetic Analysis. The incubation mixture for PhIP metabolism consisted of 100 mM sodium phosphate buffer (pH 7.4), 5 mM MgCl2, an NADPH generating system (15 mM glucose 6-phosphate, 1 unit of glucose-6-phosphate dehydrogenase, 1 mM NADP+), NADPH-P450 oxidoreductase (reductase/P450 = 1:1 in molar ratio), 100 pmol of CYP1B1, and PhIP in a total volume of 1 ml. After a 5-min preincubation, the reaction was initiated with the NADPH generating system and incubated at 37°C for 30 min. The reaction was terminated by adding one volume of ice-cold methanol. The mixture was then centrifuged at 4°C and filtered. Samples were stored at –70°C prior to analysis by HPLC within 48 h after the preparation. For the determination of kinetic parameters, eight different PhIP concentrations, ranging from 0.3 to 50 µM, were used for incubation. The selection of substrate concentrations for activity assay and the determination of kinetic parameters were based on literature (Crofts et al., 1997Go) and our pilot experiments. Commercially available human CYP1B1, CYP1A1, and CYP1A2 (Gentest) were used as positive controls to confirm the formation of PhIP metabolites under our assay conditions. Incubation without P450 enzymes or with preinactivated CYP1B1 proteins (adding methanol before initiation of the reaction) was used as a negative control.

HPLC Analysis. PhIP metabolites were analyzed using an HPLC-fluorescence system (Thermo Separation Products Inc., Fremont, CA) consisting of Spectra Physics P4000 Mobile Phase Pump, Spectra Physics AS3000 Autosampler, Spectra Physics FL2000 Fluorescence Detector, a Waters (Milford, MA) µBondapak C18 column (3.9 x 300 mm, 125 Å, 10 µm), a guard cartridge (µBondapak, 125 Å, 10 µm), and software PC1000 for data collection and analysis. The metabolites were eluted with 55% methanol in water containing 0.1% diethylamine (pH 4.0 with acetic acid). The isocratic solvent was held at a flow rate of 1.25 ml/min for 20 min. The sample injection volume was 100 µl. The excitation wavelength was 316 nm, and the emission wavelength was 370 nm. The analytical protocol was able to clearly resolve N2-OH-PhIP and 4'-OH-PhIP in less than 20 min. Concentrations of the PhIP metabolites were determined by calibration curves prepared using a standard solution of N2-OH-PhIP and 4'-OH-PhIP. Under our analytical conditions, the limits of detection were 0.02 pg for N2-OH-PhIP and 3.2 pg for 4'-OH-PhIP. For the validation of HPLC analysis, we used PhIP metabolite standards as well as the positive control and negative control samples from the in vitro metabolism.


    Results
 Top
 Abstract
 Materials and Methods
 Results
 Discussion
 References
 
Heterologous Expression of the Wild-Type and Variant CYP1B1 Proteins. All the variant CYP1B1 cDNAs were successfully constructed and used for protein expression in the Bac-to-Bac baculovirus/Sf9 insect cell system. For most of the variant proteins, immunoblot analysis of the microsomal proteins detected a single protein band with the same expected molecular weight as the wild-type CYP1B1 (Fig. 2A). There were no detectable CYP1B1 proteins in the microsomes prepared from the Sf9 cells infected with the vector only (containing no CYP1B1 cDNA) or the bacmid containing the Asn453Ser variant cDNA. The microsomal CYP1B1 protein levels for the Gly365Trp, Glu387Lys, and Arg390His variants were reproducibly lower than the wild-type and most of the variants.


Figure 2
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FIG. 2. Heterologous expression of human CYP1B1 cDNAs in Sf9 cells. Microsomal proteins were prepared from the Sf9 cells infected for 72 h with recombinant bacmids containing either wild-type or variant CYP1B1 cDNAs. A, immunoblot analysis. Microsomal proteins (1 µg) of each sample were used for electrophoresis. The membrane was probed with a CYP1B1-specific polyclonal antibody as the primary antibody, followed by goat anti-rabbit IgG conjugated with horseradish peroxidase as the secondary antibody for 1 h. Microsomes from the Sf9 cells transfected with the pFASTBAC1 vector alone (without CYP1B1 cDNA) were used as a negative control (–). B, representative CO-difference spectra. The assay solution containing microsomal proteins (2 µg/µl) was bubbled with CO for 60 s followed by addition of dithionite into the test cuvette and gentle mixing. The absorption spectrum was recorded from 500 to 400 nm. Microsomes prepared from the Sf9 cells expressing wild-type CYP1B1 and the Ser119 and Trp469 variants showed the characteristic P450 absorption peak, whereas the Leu437 only displayed a major absorption peak at 420 nm. wt, wild-type.

 

Most of the microsomes containing the expressed recombinant CYP1B1 proteins displayed the characteristic P450 absorption peak in CO-difference spectrum analysis with the average of 219 pmol/mg (range: 118–324 pmol/mg). A significant decrease in P450 content was observed in the microsomes from the cells expressing Gly365Trp, Pro379Leu, and Glu387Lys variant proteins with an average of 39 pmol/mg (range: 24–55 pmol/mg) (Table 3). Microsomes from the cells infected with the Arg390His and Asn453Ser variant cDNAs showed no detectable P450 (data not shown) and little or no detectable CYP1B1 proteins (Fig. 2A). The Pro437Leu variant showed a substantial amount of expressed CYP1B1 protein but no detectable P450 peak (Fig. 2B). All these results were confirmed by 3 to 5 independent expression experiments in the Sf9 cells. For the CYP1B1 variants with significantly lower levels of P450 content, the repeated expressions started from the expression vector reconstruction.


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TABLE 3 Expression level of CYP1B1 variant proteins in the microsomes

 

Activity of CYP1B1 Variants and Enzyme Kinetics. The formation of N2-OH-PhIP and 4'-OH-PhIP during CYP1B1-mediated PhIP metabolism was determined by a reported HPLC-fluorescence method (Crofts et al., 1997Go). We modified the original protocol by changing gradient elution (from 33 to 55%) to isocratic elution with 55% methanol. This change resulted in a satisfactory resolution of PhIP, N2-OH-PhIP, and 4'-OH-PhIP in less than 20 min instead of 40 min in the original method, which reduced the possibility of metabolite degradation when a large number of samples were analyzed. As shown in Fig. 3, the retention times of N2-OH-PhIP, PhIP, and 4'-OH-PhIP are 4, 8, and 13 min, respectively.


Figure 3
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FIG. 3. HPLC chromatograms of PhIP and its metabolites. The metabolites were eluted with 55% methanol in water containing 0.1% diethylamine (pH 4.0 with acetic acid). The isocratic solvent was held at a flow rate of 1.25 ml/min for 20 min. The sample injection volume was 100 µl. The excitation wavelength was 316 nm and the emission wavelength was 370 nm. A, mixture of the PhIP metabolite standards: 4'-OH-PhIP (5 pg) and N2-OH-PhIP (5 pg). B, metabolites produced during the incubation of PhIP (0.63 µM) with microsomes containing expressed wild-type human CYP1B1 enzyme.

 

When PhIP was incubated with microsomes containing wild-type CYP1B1, the production of N2-hydroxy PhIP and 4'-hydroxy PhIP was linear up to a 60-min incubation time and up to 120 pmol CYP1B1/ml reaction volume (data not shown). We therefore conducted the PhIP-metabolizing activity assay using a 30-min incubation time and 100 pmol CYP1B1/ml reaction volume. For the CYP1B1 variants with no detectable activity, the assay was repeated with increased amount of microsomal proteins (20-fold higher than the wild-type CYP1B1). The activity was determined at both high (10 µM) and low (1 µM) substrate concentrations. Figure 4 shows that, at 10 µM PhIP, the variants Ala119Ser, Pro379Leu, Ala443Gly, and Arg48Gly/Leu432Val displayed almost the same activity as the wild-type CYP1B1 in both N-hydroxylation and 4-hydroxylation of PhIP. The activities of the variants Trp57Cys, Gly61Glu, Arg48Gly/Ala119Ser, Arg48Gly/Ala119Ser/Leu432Val, and Arg48Gly/Ala119Ser/Leu432Val/Ala443 were lower than the wild-type CYP1B1. There was no detectable PhIP-metabolizing activity in the variants Gly365Trp, Glu387Lys, Arg390His, Pro437Leu, and Asn453Ser. It is of interest to note that, although the Arg469Trp variant showed the same level of CYP1B1 protein and P450 content (190 pmol/mg) as the wild-type, it had a total loss of PhIP-metabolizing activity. This activity profile at 10 µM substrate concentration was consistent with the result with 1 µM substrate concentration (data not shown).


Figure 4
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FIG. 4. PhIP N-hydroxylation and 4-hydroxylation activity of heterologously expressed wild-type and variant CYP1B1. The activity was determined at 10 µM PhIP. The incubation mixture for PhIP metabolism consisted of 100 mM sodium phosphate buffer (pH 7.4), 5 mM MgCl2, and an NADPH generating system. After a 5-min preincubation, the reaction was initiated with the NADPH generating system and NADPH-P450 oxidoreductase incubated at 37°C for 30 min. The reaction was terminated by adding 1 volume of ice-cold methanol. The results are the average of duplicated experiments with less than 10% variations. A, PhIP N-hydroxylation activity. B, PhIP 4-hydroxylation activity. There were no detectable activities in both N-hydroxylation and 4-hydroxylation of PhIP for the CYP1B1 variants Trp365, Lys387, His390, Leu437, Ser453, and Trp469. wt, wild-type.

 
We further selected five CYP1B1 variants that showed more than 2-fold decrease in PhIP-metabolizing activity for detailed kinetic analysis. These included the variants Trp57Cys, Gly61Glu, Arg48Gly/Ala119Ser, Arg48Gly/Ala119Ser/Leu432Val, and Arg48Gly/Ala119Ser/ Leu432Val/Ala443Gly. The kinetics of PhIP metabolism were determined with eight different substrate concentrations, ranging from 0.3 to 50 µM. The experiments were always conduced in duplicate and showed less than 10% of assay variations (data not shown). When different concentrations of PhIP were incubated with the microsomes containing the wild-type human CYP1B1, the rate of formation of N2-OH-PhIP and 4'-OH-PhIP was initially linear but reached saturation at the PhIP concentrations above 10 µM. The values of apparent Km and Vmax and catalytic efficiency (Vmax/Km) derived from the kinetics curves are shown in Table 4. The Km and Vmax values for both N-hydroxylation and 4-hydroxylation of PhIP by wild-type CYP1B1 in our kinetics study are consistent with the reported values (Crofts et al., 1997Go). The Km values are 3.6 µM for N-hydroxylation of PhIP and 4.5 µM for 4-hydroxylation in our study, whereas the corresponding values reported by Crofts et al. were 5.7 and 2.2 µM. The Vmax values for PhIP N-hydroxylation and 4-hydroxylation are 0.115 and 0.120 nmol/min/nmol, whereas the corresponding values by Crofts et al. were 0.40 and 0.93 nmol/min/nmol. For the CYP1B1 variants, although the Km for N-hydroxylation of PhIP was nearly unchanged in the Arg48Gly/Ala119Ser variant, it was increased in the other four variants (Trp57Cys, Gly61Glu, Arg48Gly/Ala119Ser/Leu432Val, and Arg48Gly/Ala119Ser/Leu432Val /Ala443Gly). The catalytic efficiency (Vmax/Km) for PhIP N-hydroxylation in the Arg48Gly/Ala119Ser/Leu432Val/Ala443Gly variant showed nearly a 10-fold decrease because of the substantial increase of the Km value. The effect of the missense changes on the kinetic parameters of N2-OH-PhIP and 4'-OH-PhIP formation appears to be different for different variants. For the Trp57Cys variant, the Km value for N2-OH-PhIP and 4'-OH-PhIP were both increased, and the Vmax values were both decreased. For the Gly61Glu variant, the Km value for N2-OH-PhIP formation was increased but was unchanged for 4'-OH-PhIP formation. The Km values of the variants Arg48Gly/Ala119Ser/Leu432Val and Arg48Gly/Ala119Ser/Leu432Val/Ala443Gly for N2-OH-PhIP formation were increased 4- to 8-fold, whereas there was no significant change in their Km values for 4'-OH-PhIP formation. For the Arg48Gly/Ala119Ser variant, the Km values were not changed for the formation of both N2-OH-PhIP and 4'-OH-PhIP formation, but the Vmax values were decreased.


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TABLE 4 Kinetic parameters for PhIP N-hydroxylation and 4-hydroxylation by human CYP1B1

The values are the average of duplicated experiments with less than 10% variation.

 


    Discussion
 Top
 Abstract
 Materials and Methods
 Results
 Discussion
 References
 
Although previous studies demonstrated that human CYP1A2 is the major enzyme in the metabolic activation of PhIP, it is mainly expressed in the liver (Shimada et al., 1996Go). In contrast, CYP1B1 is predominantly expressed in extrahepatic tissues, including prostate, mammary gland, and colon (Aklillu et al., 2005Go). Therefore, metabolic activation of PhIP in situ by CYP1B1 and other extrahepatic enzymes such as CYP1A1 is believed to play a critical role in PhIP-related carcinogenesis in these tissues, such as prostate cancer (Holme et al., 1989Go; Patterson and Murray, 2002Go). Because the amino acid substitutions in the CYP1B1 protein induced by genetic variations may alter the enzyme activity and/or protein stability, the present study characterized the functional significance of 15 CYP1B1 genetic variants in PhIP metabolism. As a result, we identified several CYP1B1 missense variants with changes in protein expression level and/or catalytic activity.

The microsomal CYP1B1 protein level was not detectable for the Asn453Ser variant and was significantly reduced for the Gly365Trp, Glu387Lys, and Arg390His variants. These CYP1B1 variants also lost their activity in both N-hydroxylation and 4-hydroxylation of PhIP. Based on a published computer modeling study (Stoilov et al., 1998Go), Gly365 belongs to the conserved core structures of CYP1B1. Substitution of Gly365 with Trp may interfere with the proper folding and heme-binding of CYP1B1 protein. Both Glu387 and Arg390 residues of CYP1B1 are localized in the conserved helix K, which are one helical turn apart and are predicted to form a salt bridge. Substitutions with Lys and His at these locations probably alter the secondary structure of CYP1B1 protein, which may affect the enzyme in its coupling with NADPH-cytochrome P450 reductase and catalytic function. The lack of detectable Asn453Ser variant protein in our observation is consistent with a recent study in which there was a significant decrease in the level of Asn453Ser variant protein transiently expressed in the COS-1 cells (Bandiera et al., 2005Go). The same authors also demonstrated that the degradation of the Asn453Ser variant protein by the proteasomal pathway is much faster than the wild-type CYP1B1 protein (Bandiera et al., 2005Go), suggesting that the substitution of Asn453 with Ser leads to an unstable protein structure. In contrast to a reported finding that the Gly61Glu variant has a greatly diminished protein stability when it is expressed in Escherichia coli (Jansson et al., 2001Go), we did not observe a significant change in protein content of this CYP1B1 variant in our expression system.

It is of interest to observe that both the Pro437Leu and Arg469Trp variants showed the same protein expression levels in the microsomes as the wild-type CYP1B1 but lost the PhIP-metabolizing activity. However, the involved inactivation mechanisms for these two variants are apparently different. The Pro437Leu variant protein lacks the characteristic P450 absorption peak in CO-difference spectrum analysis, suggesting the amino acid substitution affects the heme binding. This may be explained by the modeling result that Pro437 is localized in the meander region and precedes the heme binding region (Stoilov et al., 1998Go). On the other hand, the P450 absorption peak was clearly present for the Arg469Trp variant, which is consistent with the observation of Jansson et al. (2001Go) that the stability of this variant protein was normal. As predicted by the same model (Stoilov et al., 1998Go), Cys470 in CYP1B1 is the cysteine that is completely conserved among all the microsomal cytochrome P450 enzymes and provides the axial heme ligand in the heme-binding region. Arg469 immediately precedes Cys470 and a replacement with Trp, a larger amino acid residue with a rigid side group, may interfere with the normal conformation of the highly conserved cysteine pocket and catalytic function.

According to the CYP1B1 model (Stoilov et al., 1998Go), Trp57 is located in a hinge region and precedes the last proline residue of the hinge. As one of the most conserved amino acid residues in the same region, Gly61 is also very close to the proline. Previous studies revealed that substitution of the corresponding proline residue in CYP2C11 and CYP2C2 could influence heme incorporation and reduce enzymatic activity (Yamazaki et al., 1993Go; Chen and Kemper, 1996Go). Substitution of nonpolar and hydrophobic tryptophan with polar cysteine or replacement of noncharged glycine with charged glutamic acid in this hinge region may interfere with the proper folding of the CYP1B1 protein and result in decreased enzymatic activity as observed in PhIP metabolism.

The CYP1B1 variants Arg48Gly/Ala119Ser (CYP1B1.2), Arg48Gly/Ala119Ser/Leu432Val (CYP1B1*6), and Arg48Gly/Ala119Ser/Leu432Val/Ala443Gly (CYP1B1*7) exist as common haplotypes in several different populations (Aklillu et al., 2002Go; Aklillu et al., 2005Go). During the enzyme kinetic study of the CYP1B1 variants with reduced PhIP-metabolizing activity, the variants Arg48Gly/Ala119Ser/Leu432Val (CYP1B1.6) and Arg48Gly/Ala119Ser/Leu432Val/Ala443Gly (CYP1B1.7) were found to have the most significant change in the Km values for N2-OH-PhIP formation (14.8 and 30.1 µM, respectively, versus 3.6 µM in wild-type CYP1B1) but not in the 4'-OH-PhIP formation. Because the Arg48Gly/ Ala119Ser variant (CYP1B1.2) showed no Km value change for PhIP N-hydroxylation and in the metabolism of other substrates (Aklillu et al., 2002Go; Aklillu et al., 2005Go), it is reasonable to speculate that the Km value changes in the variants Arg48Gly/Ala119Ser/Leu432Val (CYP1B1*6) and Arg48Gly/Ala119Ser/Leu432Val/Ala443Gly (CYTP1B1*7) are mainly due to the inclusion of a common Leu432Val substitution. Ala443 is conserved in the mouse, rat, and human CYP1B1. Inclusion of an additional Ala443Gly substitution in the CYP1B1.7 variant resulted in a further increase in the Km value for PhIP N-hydroxylation, suggesting that the substitution also affects substrate binding. In addition, the alteration of enzymatic function in CYP1B1 variants is clearly substrate-dependent. Although the capacity for N-hydroxylation of PhIP was significantly decreased in both CYP1B1.6 and CYP1B1.7 variants, a significantly decreased capacity for oxidation of benzo[{alpha}]pyrene was only observed in the CYP1B1.7 variant, not in the CYP1B1.6 variant (Aklillu et al., 2005Go).

In summary, the present study demonstrates that several genetic variants of human CYP1B1 have significant changes in the protein expression level and PhIP-metabolizing activity. These results appear to be consistent with the prediction of a published CYP1B1 protein model (Stoilov et al., 1998Go). Our study provides new information on the role of involved amino acid residues in protein stability and catalysis of CYP1B1. In addition, identification of these functional CYP1B1 variants should help understand the interindividual variations in PhIP metabolism and their potential impact on the risk to human cancers related to PhIP exposure.


    Acknowledgments
 
We thank Yi-Hua Jan for help in the enzyme kinetics study and Emerson Liu for editing the manuscript.


    Footnotes
 
This work was supported by the U.S. Army Medical Research Prostate Cancer Program DAMD 17-02-0250 (J.-Y.H.).

J.-F.H. and X.-Y.H. contributed equally to this work.

Article, publication date, and citation information can be found at http://dmd.aspetjournals.org.

doi:10.1124/dmd.107.016824.

ABBREVIATIONS: HCAs, heterocyclic amines; PhIP, 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine; HPLC, high-performance liquid chromatography; P450, cytochrome P450; N2-OH-PhIP, 2-hydroxyamino-PhIP; 4'-OH-PhIP, 4-hydroxy-PhIP.

Address correspondence to: Dr. Jun-Yan Hong, School of Public Health, University of Medicine and Dentistry of New Jersey, Room 385, 683 Hoes Lane West, Piscataway, NJ 08854. E-mail: jyhong{at}eohsi.rutgers.edu


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