Table 1

Allelic frequencies of PXR protein variants in Caucasians and Africans

Variant1-aEffectWT Sequence1-b (5′-3′)Mutation Sequence1-b(5′-3′)CaucasiansAfricans
N%N%
Exon 2
 c.52G>AE18K ACTGTGAGGAC ACTGTAAGGAC 3000.0741.4
 c.79C>TP27S GAAAGCCCAGT GAAAGTCCAGT 3000.07414.9
 c.106G>AG36R AAGTCGGAGGT AAGTCGGAGGT 3003.0740.0
Exon 4
 c.418G>AV140M TGGGAGTGCAG TGGGAATGCAG 4180.2740.0
 c.488A>GD163G CTTTGACACTA CTTTGGCACTA 4180.0741.4
Exon 8
 c.1108G>AA370T AATTCGCCATT AATTCACCATT 3120.0641.6
  • WT, wild-type; N, number of chromosomes analyzed.

  • 1-a  The nomenclature of the variants is based on Antonarakis and the Nomenclature Working Group (1998). As the translation initiation site, the CTG with the C at position 280 of the cDNA (GI 3769538) is numbered +1. The nucleotide 5′ to +1 is numbered −1.

  • 1-b  The variant position is indicated in bold.