Gene | GenBank ID | Target | Function | Probe Sequence |
---|---|---|---|---|
OCT1 | X98344 | 162–179 | CE | gtccaggggtgaagcccaTTTTTctcttggaaagaaagt |
X98344 | 509–526 | CE | gcccaggaagaagcccaaTTTTTctcttggaaagaaagt | |
NM_012697 | 657–673 | CE | catgccctgcagcaggcTTTTTctcttggaaagaaagt | |
X98344 | 675–692 | CE | cccagctgcccttgctgaTTTTTctcttggaaagaaagt | |
X98344 | 181–200 | LE | ccccaggattctggcaataaTTTTTaggcataggacccgtgtct | |
X98344 | 300–323 | LE | agtccacctcatacctcatgcactTTTTTaggcataggacccgtgtct | |
X98344 | 465–484 | LE | cactttccaggcgtctccacTTTTTaggcataggacccgtgtct | |
X98344 | 527–547 | LE | aatgtaacccacaaccagggaTTTTTaggcataggacccgtgtct | |
X98344 | 591–611 | LE | caccggacacagatgtgaccaTTTTTaggcataggacccgtgtct | |
X98344 | 612–629 | LE | gggccaccgctgttagcaTTTTTaggcataggacccgtgtct | |
X98344 | 694–715 | LE | tgtgatcaaggtatagccggacTTTTTaggcataggacccgtgtct | |
X98344 | 716–736 | LE | gtagccagagccgacaaactcTTTTTaggcataggacccgtgtct | |
X98344 | 203–219 | BL | cgctggctcagctcagc | |
X98344 | 239–260 | BL | gcacagtgtagttcagctcctc | |
X98344 | 262–279 | BL | tccgaaggtcccaggccc | |
X98344 | 418–438 | BL | gaggagccgggagtgtcgtat | |
X98344 | 439–463 | BL | caccaggttaaactcagtgacgatg | |
X98344 | 485–508 | BL | gttcacacaggactgaaaaaggtc | |
X98344 | 552–570 | BL | agcttacggccaaacctgt | |
X98344 | 571–590 | BL | gcgtggtcaccaagagacag | |
X98344 | 631–656 | BL | gaaagagcaacatggatgtatagtct | |
OCT2 | D83044 | 61–80 | CE | gcagctgttcctgaggcttcTTTTTctcttggaaagaaagt |
D83044 | 316–333 | CE | tccgaaggtcccagacccTTTTTctcttggaaagaaagt | |
D83044 | 645–666 | CE | gccccagagatagcattgatgaTTTTTctcttggaaagaaagt | |
D83044 | 667–686 | CE | tgggagaaatcgccatgagaTTTTTctcttggaaagaaagt | |
D83044 | 82–100 | LE | ggtcgacatggtccctggaTTTTTaggcataggacccgtgtct | |
D83044 | 102–128 | LE | cccctatatgttctagaatatcatccaTTTTTaggcataggacccgtgtct | |
D83044 | 216–237 | LE | tggtggtcaggggtaaatcctaTTTTTaggcataggacccgtgtct | |
D83044 | 354–377 | LE | agtccacttcatacctcatgcactTTTTTaggcataggacccgtgtct | |
D83044 | 583–605 | LE | ccgctaggtagccaatcatcataTTTTTaggcataggacccgtgtct | |
D83044 | 606–624 | LE | aacttccggccaaacctgtTTTTTaggcataggacccgtgtct | |
D83044 | 687–709 | LE | aaacaccaacatccaggcatagtTTTTTaggcataggacccgtgtct | |
D83044 | 130–153 | BL | gtttgtttctgaaaaaggtggaat | |
D83044 | 154–177 | BL | gacagcagagctaagaggaaaaat | |
D83044 | 178–194 | BL | tgggggtgaaggcacca | |
D83044 | 195–215 | BL | ggaaaacgatgcccacgtaga | |
D83044 | 238–255 | BL | gccccaggactccagcag | |
D83044 | 257–273 | BL | cgctggctcagcttggc | |
D83044 | 293–314 | BL | gcacggtgtagttcagctcctc | |
D83044 | 419–437 | BL | ggttcctgtccgcagccag | |
D83044 | 472–492 | BL | gaggagccgggagtgttgtat | |
D83044 | 493–517 | BL | caccaggttaaactcagtgacaatg | |
D83044 | 518–538 | BL | cagcatccaggagtgagcaca | |
D83044 | 539–563 | BL | cgttcactactgactgaaacaggtc | |
D83044 | 564–582 | BL | gcaccgatgaaaaacccca | |
D83044 | 625–644 | BL | ggatggtgaccaagaggcag | |
OCT3 | AF055286 | 616–633 | CE | gggacgtgaagctccggcTTTTTctcttggaaagaaagt |
AF055286 | 668–690 | CE | gtattggtgtcttccagcaggtaTTTTTctcttggaaagaaagt | |
AF055286 | 711–728 | CE | ggaaggcagcgagtgggtTTTTTctcttggaaagaaagt | |
AF055286 | 900–918 | CE | ctgccgtatctgtccgctgTTTTTctcttggaaagaaagt | |
AF055286 | 1005–1023 | CE | ccttgcaggaagcggaagaTTTTTctcttggaaagaaagt | |
AF055286 | 595–615 | LE | gtggtgaggttccactcctccTTTTTaggcataggacccgtgtct | |
AF055286 | 634–649 | LE | gccacggcgctcagctTTTTTaggcataggacccgtgtct | |
AF055286 | 691–710 | LE | cgcagctgagctctgagctgTTTTTaggcataggacccgtgtct | |
AF055286 | 745–761 | LE | cgctgcagggcaccagaTTTTTaggcataggacccgtgtct | |
AF055286 | 762–779 | LE | ccacatagcgccagtcgcTTTTTaggcataggacccgtgtct | |
AF055286 | 801–821 | LE | cgcagacaaggtcaaactggcTTTTTaggcataggacccgtgtct | |
AF055286 | 822–839 | LE | ccaacatccaggcgttgcTTTTTaggcataggacccgtgtct | |
AF055286 | 879–899 | LE | catagcccaaggtaaaagcccTTTTTaggcataggacccgtgtct | |
AF055286 | 919–944 | LE | aacaggatattaagtaaacgatgagcTTTTTaggcataggacccgtgtct | |
AF055286 | 945–961 | LE | cgtgatgccaacgccgaTTTTTaggcataggacccgtgtct | |
AF055286 | 962–981 | LE | gcaaacgccaccacaactccTTTTTaggcataggacccgtgtct | |
AF055286 | 1024–1041 | LE | gccccctttccaaacaccTTTTTaggcataggacccgtgtct | |
AF055286 | 650–667 | BL | gcggtgacagtggccttg | |
AF055286 | 729–744 | BL | ggagcggagcggttgg | |
AF055286 | 780–800 | BL | tgacgatggtggagtgggtct | |
AF055286 | 840–859 | BL | caagatggcttgggtgaggt | |
AF055286 | 860–878 | BL | cagccaggaagccaaggtt | |
AF055286 | 982–1004 | BL | tcacaaacacagaaaaattcggt | |
OCTN1 | AF169831 | 1226–1247 | CE | cagccaggctgtgaaataagctTTTTTctcttggaaagaaagt |
AF169831 | 1268–1292 | CE | cagcaccccagctataatatatctcTTTTTctcttggaaagaaagt | |
AF169831 | 1368–1386 | CE | ccccaaatttccccagcatTTTTTctcttggaaagaaagt | |
AF169831 | 1411–1430 | CE | gagctccgctgtgaagacgtTTTTTctcttggaaagaaagt | |
AF169831 | 1677–1699 | CE | tctctgtccatggagactgttgaTTTTTctcttggaaagaaagt | |
AF169831 | 1830–1851 | CE | tgacttctcgatcctcctgtccTTTTTctcttggaaagaaagt | |
AF169831 | 1293–1311 | LE | gcacacctcctccccagaaTTTTTaggcataggacccgtgtct | |
AF169831 | 1432–1450 | LE | ttcctgaccagggttgggtTTTTTaggcataggacccgtgtct | |
AF169831 | 1451–1469 | LE | ggtgatgcccacagccatgTTTTTaggcataggacccgtgtct | |
AF169831 | 1471–1488 | LE | ccaccctcgaggccatggTTTTTaggcataggacccgtgtct | |
AF169831 | 1509–1531 | LE | ttataagcacccaggtacacgaaTTTTTaggcataggacccgtgtct | |
AF169831 | 1608–1632 | LE | agttctctggtagagtcactccaaaTTTTTaggcataggacccgtgtct | |
AF169831 | 1633–1654 | LE | ctgactttctgcatctgctccaTTTTTaggcataggacccgtgtct | |
AF169831 | 1655–1676 | LE | ttttttcccacatctgaaccctTTTTTaggcataggacccgtgtct | |
AF169831 | 1748–1768 | LE | tgtttttcagtttgccacgtgTTTTTaggcataggacccgtgtct | |
AF169831 | 1769–1788 | LE | cctgctcattgtaccccaccTTTTTaggcataggacccgtgtct | |
AF169831 | 1809–1828 | LE | cataccaagagggcaggcttTTTTTaggcataggacccgtgtct | |
AF169831 | 1248–1267 | BL | cgaggcagggttcgaagtag | |
AF169831 | 1312–1334 | BL | aggtaccacttggaccaagagaa | |
AF169831 | 1335–1360 | BL | ccaatggacacaaagttgtaatcttc | |
AF169831 | 1489–1506 | BL | agggggcaatgatgctgc | |
AF169831 | 1560–1583 | BL | gattccaatgaggacagtcagact | |
AF169831 | 1584–1607 | BL | actctcagggaaaaaaagtgtgat | |
AF169831 | 1701–1725 | BL | cagttattagaaccttggggttttc | |
AF169831 | 1726–1747 | BL | ccttggaaaccttgtcagaatg | |
AF169831 | 1790–1807 | BL | caggctggctccagcaca | |
OCTN2 | AB017260 | 55–73 | CE | tccggggatctggggatacTTTTTctcttggaaagaaagt |
AB017260 | 145–161 | CE | tgaggcgctggaagggcTTTTTctcttggaaagaaagt | |
AB017260 | 182–200 | CE | agccattggggatgatgctTTTTTctcttggaaagaaagt | |
AB017260 | 571–592 | CE | tgagagctgtcccgaaatgaagTTTTTctcttggaaagaaagt | |
AB017260 | 747–769 | CE | ggaaagaatttctgttcccaggaTTTTTctcttggaaagaaagt | |
AB017260 | 770–793 | CE | ggcgaatataattcgaattgacttTTTTTctcttggaaagaaagt | |
AB017260 | 74–91 | LE | agcctcccacaacacccgTTTTTaggcataggacccgtgtct | |
AB017260 | 108–127 | LE | ggcggtcacctcgtcgtagtTTTTTaggcataggacccgtgtct | |
AB017260 | 201–224 | LE | ggaacacgatagacataccattgaTTTTTaggcataggacccgtgtct | |
AB017260 | 239–257 | LE | gcacaaggcaacggtgctcTTTTTaggcataggacccgtgtct | |
AB017260 | 295–315 | LE | ttcgtctccaacgggatactgTTTTTaggcataggacccgtgtct | |
AB017260 | 316–333 | LE | ggcacctgtcgtccgtccTTTTTaggcataggacccgtgtct | |
AB017260 | 350–368 | LE | cgatggtggccagtcggtaTTTTTaggcataggacccgtgtct | |
AB017260 | 404–422 | LE | gctgctccaggtccacgtcTTTTTaggcataggacccgtgtct | |
AB017260 | 444–464 | LE | ccttgttgtactcccagccatTTTTTaggcataggacccgtgtct | |
AB017260 | 486–506 | LE | acaccaggtcccactctgtcaTTTTTaggcataggacccgtgtct | |
AB017260 | 507–528 | LE | ggggctttccagtcatccttacTTTTTaggcataggacccgtgtct | |
AB017260 | 552–570 | LE | gagcccatcagcacacccaTTTTTaggcataggacccgtgtct | |
AB017260 | 614–634 | LE | gcccatggtcaaaaacagcacTTTTTaggcataggacccgtgtct | |
AB017260 | 680–704 | LE | ggacaaaaagcactgtaaacatctcTTTTTaggcataggacccgtgtct | |
AB017260 | 705–725 | LE | agatctgacccatgccaacaaTTTTTaggcataggacccgtgtct | |
AB017260 | 726–746 | LE | caaatgctgccacgtagttggTTTTTaggcataggacccgtgtct | |
AB017260 | 92–107 | BL | cccgcatgccgtcctc | |
AB017260 | 128–144 | BL | ccccactcgcccaggaa | |
AB017260 | 162–181 | BL | ggcgctgagcaggaagaaaa | |
AB017260 | 225–238 | BL | cggggtccccgcca | |
AB017260 | 258–279 | BL | ctgctcaagttcacggtgtgag | |
AB017260 | 280–294 | BL | tggttgcgccacgcg | |
AB017260 | 334–349 | BL | gcggcggcagctctga | |
AB017260 | 369–387 | BL | cccagcgcagagaagttgg | |
AB017260 | 388–403 | BL | ccgtcccggctccagc | |
AB017260 | 423–443 | BL | ccaggcagttctcttgttcca | |
AB017260 | 465–485 | BL | cgatggtggacaggaagacgt | |
AB017260 | 529–551 | BL | cgaaaaacaaggaggtggtgagt | |
AB017260 | 593–613 | BL | attcttgcgaccaaacctgtc | |
AB017260 | 635–655 | BL | gaagctgaagccagtctgcat | |
AB017260 | 656–679 | BL | gaagttcacagagaagagctgcag |
Target refers to the sequence of the mRNA transcript as enumerated in the GenBank file. Function refers to the utility of the oligonucleotide probe in the bDNA assay.
CE, capture extender; LE, label extender; BL, blocker probe.