Oligonucleotide probes generated for analysis of mouse Oct mRNA expression by branched DNA signal amplification assay
Targeta | Functionb | Sequence | Target | Function | Sequence |
|---|---|---|---|---|---|
| Oct1 (NM_009202) | Oct2 (NM_013667) | ||||
| 673-691 | CE | cacccagctgcctttgctgTTTTTctcttggaaagaaagt | 1024-1045 | CE | agagagactggcaccgattttcTTTTTctcttggaaagaaagt |
| 817-833 | CE | gctggagccagcgccagTTTTTctcttggaaagaaagt | 1158-1180 | CE | tggtagagaacagagctcgtgaaTTTTTctcttggaaagaaagt |
| 850-872 | CE | aatacagcaggaagaggaaggtgTTTTTctcttggaaagaaagt | 1200-1216 | CE | ttgtcccctgcgaggccTTTTTctcttggaaagaaagt |
| 935-956 | CE | gtgcaatttgctccattatcctTTTTTctcttggaaagaaagt | 1408-1429 | CE | gctatggtgatgcccattctacTTTTTctcttggaaagaaagt |
| 1061-1079 | CE | gggtgtgcttcctcaggctTTTTTctcttggaaagaaagt | 998-1023 | LE | catttttcttagcaatatgcttaatgTTTTTaggcataggacccgtgtct |
| 692-714 | LE | tctgtgatcaaggtgtagccagaTTTTTaggcataggacccgtgtct | 1046-1065 | LE | catctgccgtcaggctctgaTTTTTaggcataggacccgtgtct |
| 715-735 | LE | ctgtagccagagccgacaaacTTTTTaggcataggacccgtgtct | 1066-1089 | LE | ggttcaatttcatgccagtatcctTTTTTaggcataggacccgtgtct |
| 736-758 | LE | ggtacaagatggctgtcgttctcTTTTTaggcataggacccgtgtct | 1134-1157 | LE | ccaattgtacatcaagatcaacgtTTTTTaggcataggacccgtgtct |
| 778-796 | LE | cccagcaagccccactagcTTTTTaggcataggacccgtgtct | 1181-1199 | LE | catgtgcatgatgaggcccTTTTTaggcataggacccgtgtct |
| 873-893 | LE | gggattctgggacaaaccagtTTTTTaggcataggacccgtgtct | 1244-1262 | LE | agctgggaattccaccaggTTTTTaggcataggacccgtgtct |
| 894-912 | LE | tgagacaacagccaccgggTTTTTaggcataggacccgtgtct | 1285-1303 | LE | cggcgaccaatccggtctaTTTTTaggcataggacccgtgtct |
| 978-1000 | LE | gcacatcatcttcaggtcagcagTTTTTaggcataggacccgtgtct | 1304-1324 | LE | tttgacacagcccagggatagTTTTTaggcataggacccgtgtct |
| 1024-1042 | LE | tgcaaacgaaggactccgcTTTTTaggcataggacccgtgtct | 1325-1343 | LE | ggctgctcctgccaccataTTTTTaggcataggacccgtgtct |
| 1080-1105 | LE | agagaaccatagatacatcaggatgaTTTTTaggcataggacccgtgtct | 1344-1365 | LE | ggataaaaaccgaagctaggcaTTTTTaggcataggacccgtgtct |
| 1106-1125 | LE | ccctggtacagcacagcacaTTTTTaggcataggacccgtgtct | 1366-1389 | LE | ttttcagccactgtagatcatcagTTTTTaggcataggacccgtgtct |
| 1126-1146 | LE | gctcccacatgcatgatgaggTTTTTaggcataggacccgtgtct | 1390-1407 | LE | ccaagcacgccacggtaaTTTTTaggcataggacccgtgtct |
| 1147-1166 | LE | ggtagaggttggcccctgtgTTTTTaggcataggacccgtgtct | 1430-1450 | LE | accaggcagaccatttcgtagTTTTTaggcataggacccgtgtct |
| 759-777 | BL | cccactgtgaaggccacct | 1090-1110 | BL | tgaccaagtccaggaacgaag |
| 797-816 | BL | tctggaatggcataggccac | 1111-1133 | BL | atgtttccttatctgaggggttc |
| 834-849 | BL | ggcagggacaccgcca | 1217-1243 | BL | gcagagtagaagaaatccaagtagatg |
| 913-934 | BL | taccgcttgagtggttctcttc | 1263-1284 | BL | tggtgagaatgatgatgaaggc |
| 957-977 | BL | ggggcaccttcctgttcttct | |||
| 1001-1023 | BL | ctctctgaggcatcttcctcaag | |||
| 1043-106 | BL | gggggtgcggaacaggtc | |||
| Oct3 (NM_011395) | Octn1 (NM_019687) | ||||
| 2262-2284 | CE | acctaatgggtgagagacttgctTTTTTctcttggaaagaaagt | 993-1013 | CE | ggatgatctgttcggcctctgTTTTTctcttggaaagaaagt |
| 2306-2328 | CE | tcctgagaactggagaactggttTTTTTctcttggaaagaaagt | 1051-1074 | CE | agctctagaggatcgaatatccctTTTTTctcttggaaagaaagt |
| 2521-2540 | CE | acctcagcacctgcaggagaTTTTTctcttggaaagaaagt | 1098-1121 | CE | ggtccaggattatgactttctgctTTTTTctcttggaaagaaagt |
| 2713-2737 | CE | ttttaaattctaagacctgggaaatTTTTTctcttggaaagaaagt | 1319-1345 | CE | gaatagcaccccagctataatatatctTTTTTctcttggaaagaaagt |
| 2192-2215 | LE | aacaggtccaagattatgtgttccTTTTTaggcataggacccgtgtct | 970-992 | LE | caaatctcctctgggatatcagcTTTTTaggcataggacccgtgtct |
| 2216-2238 | LE | gggtacctactgggtcttcatgaTTTTTaggcataggacccgtgtct | 1014-1034 | LE | tgttcatctttgcggctttctTTTTTaggcataggacccgtgtct |
| 2239-2261 | LE | gaatgagaacctagccagaatccTTTTTaggcataggacccgtgtct | 1035-1050 | LE | gctggcgccacgatgcTTTTTaggcataggacccgtgtct |
| 2373-2392 | LE | cgcacttctggacacgtgccTTTTTaggcataggacccgtgtct | 1075-1097 | LE | gcttcaaggagtttagctcctgtTTTTTaggcataggacccgtgtct |
| 2393-2416 | LE | ggtgtgttgatcagatcagctgagTTTTTaggcataggacccgtgtct | 1122-1143 | LE | gcaatgttccgagtcctgaacaTTTTTaggcataggacccgtgtct |
| 2541-2559 | LE | gcctaacctgggacctgggTTTTTaggcataggacccgtgtct | 1144-1163 | LE | cagccatcacggttatggtgTTTTTaggcataggacccgtgtct |
| 2560-2582 | LE | ttgtgttgcatttaaggagctgtTTTTTaggcataggacccgtgtct | 1164-1185 | LE | gaggttagcatccacagcatcaTTTTTaggcataggacccgtgtct |
| 2583-2604 | LE | aataccacagccaggtcctctgTTTTTaggcataggacccgtgtct | 1210-1235 | LE | catctccatgtaaattaggaacattgTTTTTaggcataggacccgtgtct |
| 2605-2625 | LE | gggactgcagcatgacttcacTTTTTaggcataggacccgtgtct | 1346-1364 | LE | gaagcacacctcctccccaTTTTTaggcataggacccgtgtct |
| 2692-2712 | LE | ccaaatccgtgctttgttttcTTTTTaggcataggacccgtgtct | 1186-1209 | BL | agagacagagcaaagtaacccact |
| 2738-2766 | LE | cacaaatatgacataattatccctttactTTTTTaggcataggacccgtgtct | 1236-1259 | BL | cagagaggaagcagttcaggtaga |
| 2285-2305 | BL | ggggccttttcatctctcctt | 1260-1281 | BL | taagctggaacttcaatcaggc |
| 2329-2351 | BL | gcttcctggatggtactgtcttg | 1282-1302 | BL | agtagcagccaggctgtgaag |
| 2352-2372 | BL | aggccttggtttgttcatcct | 1303-1318 | BL | ccgtggcagggttcgc |
| 2417-2441 | BL | gactcttcagaacactcttcactgc | |||
| 2442-2465 | BL | caagggaagaaatagcagttctca | |||
| 2466-2486 | BL | cgaaggcttgtattcggagct | |||
| 2487-2503 | BL | cggacatgtcggccctg | |||
| 2504-2520 | BL | caggaggggagcagcgc | |||
| 2626-2644 | BL | gcgaaatatctggggcctg | |||
| 2645-2666 | BL | cagtggtcctctgaaggaggtg | |||
| 2667-2691 | BL | ttcctcaataaagagcctgtgatta | |||
| Octn2 (NM_011396) | Octn3 (NM_019723) | ||||
| 592-615 | CE | tctgagagctgtcctgaaatgaagTTTTTctcttggaaagaaagt | 1480-1499 | CE | ggtgattccaaacttccccaTTTTTctcttggaaagaaagt |
| 770-792 | CE | ttggaaagaatttctgttcccagTTTTTctcttggaaagaaagt | 1646-1669 | CE | cttcccatgaggatataaggtaggTTTTTctcttggaaagaaagt |
| 793-815 | CE | tggcgaatataattcgaattgacTTTTTctcttggaaagaaagt | 1766-1789 | CE | cttagggattgcctttgttttagtTTTTTctcttggaaagaaagt |
| 986-1007 | CE | tcacctctgcctctttaattcgTTTTTctcttggaaagaaagt | 1833-1850 | CE | ttcggaggttcgggaggtTTTTTctcttggaaagaaagt |
| 573-591 | LE | gagcccatcagcacacccaTTTTTaggcataggacccgtgtct | 1456-1479 | LE | ccatcaccagggtagtagacaagtTTTTTaggcataggacccgtgtct |
| 637-656 | LE | tgcccatggtcaaaaacagcTTTTTaggcataggacccgtgtct | 1500-1523 | LE | cacatagaccatggagtaggcagaTTTTTaggcataggacccgtgtct |
| 702-726 | LE | aggacaaaaagcactgtaaacatctTTTTTaggcataggacccgtgtct | 1546-1567 | LE | acacccatgtttctgaccacagTTTTTaggcataggacccgtgtct |
| 727-747 | LE | gagatctgacccatgccaacaTTTTTaggcataggacccgtgtct | 1568-1585 | LE | gctgtggagctgacccccTTTTTaggcataggacccgtgtct |
| 748-769 | LE | gacaaatgctgccacgtagttgTTTTTaggcataggacccgtgtct | 1586-1602 | LE | tgctgccaaggcgggatTTTTTaggcataggacccgtgtct |
| 816-840 | LE | gcataaaatatgcaaactcctaaggTTTTTaggcataggacccgtgtct | 1629-1645 | LE | cggcggtcataggcaccTTTTTaggcataggacccgtgtct |
| 886-904 | LE | cagcagcagcatcctccagTTTTTaggcataggacccgtgtct | 1670-1694 | LE | gatgatagctgtcaggatggttagaTTTTTaggcataggacccgtgtct |
| 923-943 | LE | ccagagagccccacatagcacTTTTTaggcataggacccgtgtct | 1743-1765 | LE | tttttgactttttgcatctcgtcTTTTTaggcataggacccgtgtct |
| 964-985 | LE | gccttgagagatgagccatcgtTTTTTaggcataggacccgtgtct | 1809-1832 | LE | tcgggatacatttcctttagactcTTTTTaggcataggacccgtgtct |
| 1008-1025 | LE | tggcagctttgcggatgaTTTTTaggcataggacccgtgtct | 1851-1873 | LE | accaggtgttaaaagcctttaggTTTTTaggcataggacccgtgtct |
| 1026-1047 | LE | ggtgcaacaatcccattgatttTTTTTaggcataggacccgtgtct | 1874-1896 | LE | cattcagttcaatcagcttctggTTTTTaggcataggacccgtgtct |
| 616-636 | BL | acattcttgcgaccaaacctg | 1897-1919 | LE | tttctgacaacatgcaggttttcTTTTTaggcataggacccgtgtct |
| 657-677 | BL | ggaagctgaagccagtctgca | 1524-1545 | BL | tggggtacagctcagctgtgta |
| 678-701 | BL | cgaagttcacagagaagacctgca | 1603-1628 | BL | tagataaacaaagtagggagacagga |
| 841-860 | BL | gcagcaccatgaagccaaac | 1695-1720 | BL | ccagaactctctgggaagaataaagt |
| 861-885 | BL | tctctgatgaagtatgcaaacagtg | 1721-1742 | BL | aatggtttctgggagagaaacc |
| 905-922 | BL | ccctggcacagtgagcgc | 1790-1808 | BL | cttcggggaccctttcttg |
| 944-963 | BL | ggggactcagggatgaacca |
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