TABLE 1

Assay identification number or sequences of primers and probes used for the TaqMan gene expression assays

Gene Name	RefSeq Identification	Assay Identification	Sequences (5′ to 3′)
Gene Name	RefSeq Identification	Assay Identification	Forward Primer	Reverse Primer	Probe
ABC transporters
P-gp	NM_000927	Hs01067802_m1
MDR3	NM_000443		`CATCAATGACACCACTGAACTCAA`	`AACCTTGTCACCAATTCCTTCAC`	`CGCGGCTAACAGATGACATCTCCAAAA`
BSEP	NM_003742		`GGGCCATTGTACGAGATCCTAA`	`TGCACCGTCTTTTCACTTTCTG`	`TCTTGCTACTAGATGAAGCCACTTCTGCCTTAGA`
MRP1	NM_004996		`CATCGTGCAGGCGAGTGT`	`TCCTCACGGTGATGCTGTTC`	`TGACAGCATCGAGCGACGGCC`
MRP2	NM_000392	Hs00166123_m1
MRP3	NM_003786	Hs00358656_m1
MRP4	NM_005845	Hs00195260_m1
BCRP	NM_004827		`CAGGTCTGTTGGTCAATCTCACA`	`TCCATATCGTGGAATGCTGAAG`	`CCATTGCATCTTGGCTGTCATGGCTT`
SLC transporters
NTCP	NM_003049		`CCATGACACCACTCTTGATTGC`	`CGTCTGCACCGTCCATTG`	`ACCTCCTCCCTGATGCCTTTTATTGGC`
OCT1	NM_003057	Hs00427550_m1
OAT2	NM_006672		`CTGCTAGTGTCCTCCGATATGAAG`	`GCACCGTAGGGTACAACTCTGAA`	`AAGCTGCCTTCACCACTGCCTACCTG`
OATP1B1	NM_006446		`GTACCACTTTCTTATTGCAACTCAGACT`	`CAGGGTGAGATGTAAGTTATTCCATTG`	`TCCACAGACTGGTTCCCATTGACTTTCA`
OATP1B3	NM_019844	Hs00251986_m1
OATP2B1	NM_007256		`TCCTGTTTGCAGTGACCATGA`	`CACCTTCTGGCATCTGGTTAATG`	`CAGCCTCATGCTGCGCCTTTATGTG`
Cytochrome P450 enzymes
CYP1A1	NM_000499		`TGGTCAAGGAGCACTACAAAACC`	`AGGTCCAAGACGATGTTAATGATCT`	`ATGAGAACGCCAATGTCCAGCTGTCA`
CYP1A2	NM_000761		`GGAGACCTTCCGACACTCCTC`	`CGTTGTGTCCCTTGTTGTGC`	`TTCTTGCCCTTCACCATCCCCAC`
CYP2A6	NM_000762	Hs00711162_s1
CYP2B6	NM_000767		`TTGTTCTACCAGACTTTTTCACTCATC`	`GGAAAGTATTTCAAGAAGCCAGAGA`	`TCTGTATTCGGCCAGCTGTTTGAGCTC`
CYP2C8	NM_000770	Hs00426387_m1
CYP2C9	NM_000771	Hs00426397_m1
CYP2C18	NM_000772	Hs00426403_m1
CYP2C19	NM_000769	Hs00426380_m1
CYP2D6	NM_000106	Hs00164385_m1
CYP2E1	NM_000773	Hs00559368_m1
CYP3A4	NM_017460		`CAGGAGGAAATTGATGCAGTTTT`	`GTCAAGATACTCCATCTGTAGCACAGT`	`CCCAATAAGGCACCACCCACCTATGA`
CYP3A5	NM_000777		`TGGACTTTTTAAGAGACTGGGAATTC`	`AAATTTCCAGAGACCCTGACGAT`	`CACACCTCTGCCTTTGTTGGGAAATGTT`
ISGs
CIG5	NM_080657		`AGATGTTTCTGAAGCGAGGA`	`GCAGACAATGGCAGTTACTC`	`TGGATTGGTAGAGCGGAAAGTGGA`
G1P2	NM_005101		`CTCATCTTTGCCAGTACAGG`	`AGCTCTGACACCGACAT`	`CCATGGGCTGGGACCTGACG`
G1P3	NM_002038		`AAGGCCCTGACCTTCAT`	`ATTCAGGATCGCAGACCA`	`AGGAGGACTCGCAGTCGCC`
HSXIAPAF1	NM_017523		`CTTGAGCACCAGCAGG`	`GCATGTCCAGTTTGCAGA`	`TCATAAGGCCAATGAGTGCCAGGA`
IFI27	NM_005532		`GTAGTTTTGCCCCTGGC`	`GACATCATCTTGGCTGCT`	`TGTGATTGGAGGAGTTGTGGCTGT`
IFI35	NM_005533		`CAAGATGAGGCTGTGGGA`	`AGACTTAGGCACTTCCGG`	`CCCCAAAGACAAGGTCCCATTTTCAG`
IFI44	NM_006417		`GCTACCCTCAGCTCTAGC`	`CGCTTCCCTCCAAAATGA`	`ACTGCCATACTTCTTGATCTGTTGTACTGT`
IFIT2	NM_001547		`AGGAAGATTTCTGAAGAGTGC`	`GTTCCAGGTGAAATGGCA`	`CACTGCAACCATGAGTGAGAACAATAAGAA`
IFITM1	NM_003641		`TCCTCATGACCATTGGATTCATC`	`CCGTTTTTCCTGTATTATCTGTAACATAA`	`AGACTGTCACAGAGCCGAATACCA`
IRF7	NM_001572		`GCAGCGTGAGGGTGTGTCTT`	`GGAAGCACTCGATGTCGTCAT`	`CCTGTCCAGCGCCAACAGCC`
IRF9/ISGF3G	NM_006084	Hs00196051_m1
MX1	NM_002462		`AAGGAATGGGAATCAGTCATGAG`	`TCTATTAGAGTCAGATCCGGGACAT`	`CACCCTGGAGATCAGCTCCCGA`
MX2	NM_002463		`CTAGAGCTTCAGGACCCT`	`TGATGGTCAGGTCTGGAAC`	`CGTTCTGGGCTTTGTGTATCTCTTTCTC`
OAS1	NM_016816		`TGTGTGTCCAAGGTGGTAAAGG`	`CAACCAGGTCAGCGTCAGATC`	`CCTCAGGCAAGGGCACCACCCT`
OAS2	NM_016817	Hs00942643_m1
OAS3	NM_006187	Hs00196324_m1
OASL	NM_003733	Hs00984390_m1
SP110	NM_004510		`CAAAGCGATGAGATCCTGAG`	`CTGAGTCTTCTTCCGCATTC`	`CTTGTCATTGGTCACTGAAGTGCTTCT`
STAT1	NM_007315		`GTGGAAAGACAGCCCTGCAT`	`ACTGGACCCCTGTCTTCAAGAC`	`AACGCACCCTCAGAGGCCGC`
TLR3	NM_003265	Hs01551078_m1
TNFSF10	NM_003810		`TGCGTGCTGATCGTGATCTT`	`GTACTTGTCCTGCATCTGCTTCA`	`TGCTCCTGCAGTCTCTCTGTGTGGCT`
TRIM22	NM_006074		`GCAGGAGTTTGTGACCAA`	`AGAGGTTCTGTCAGGAGC`	`CCAAGGGAGCAGTGCAATGGATTT`
Others
GAPDH	NM_002046		`GAAGGTGAAGGTCGGAGTC`	`GAAGATGGTGATGGGATTTC`	`CAAGCTTCCCGTTCTCAGCC`
HCV (5′-UTR)			`GCGACACTCCACCATAGATCACT`	`CACTCGCAAGCACCCTATCA`	`AGGCCTTTCGCGACCCAACACTACTC`
			`CGACACTCCACCATGAATCACT`		`AGGCCTTTCGCAACCCAACGCTACT`
			`CACTCCGCCATGAAYCACT`^{^a}

UTR, untranslated region.
↵a Y = C or T.