TABLE 1

Generation of initial conformation from docking experiments for CYP1A2 substrates for MD simulations

SubstratesMetabolic ReactionDistance to Fe First Ranked Pose (Å)Selected Initial Pose for MDDistance to Fe Selected Pose
MajorMinorMajorMinorMajorMinor
ÅÅ
EllipticineAromatic OH C2Aromatic OH C35.35.6First pose5.35.6
MexiletineN-Oxidation N3Aromatic OH C107.98.8Constrained docking5.011.8
PhenacetinAliphatic OH C23.7First pose3.7
PropranololN-Deisopropylation C2Aromatic OH C12, C1411.34.5, 6.2Sixteenth pose6.111.9, 11.2
RiluzoleN-Oxidation N18.9Constrained docking4.4
TacrineAliphatic OH C1Aromatic OH C2, C3, C49.410.3, 9.8, 8.8Second pose5.64.3, 4.5, 4.8
LidocaineN-Deethylation C1, C5Aromatic OH C145.3, 6.011.4First pose5.3, 6.011.4
PropafenoneN-Depropylation C113.0Twelfth pose5.0
  • OH, hydroxylation.