A new CYP2D6 allele with a nine base insertion in exon 9 in a Japanese population associated with poor metabolizer phenotype

Pharmacogenetics. 1996 Oct;6(5):395-401. doi: 10.1097/00008571-199610000-00003.

Abstract

The CYP2D6 gene of a Japanese sparteine poor metabolizer (PM, proband) showing a urinary sparteine metabolic ratio of 31.6 was analysed, and a heterozygous CYP2D6(D), a deletional type, was found by restriction fragment length polymorphism analysis with Xba I enzyme. The PM did not have any other previously described mutations in the CYP2D6 gene causing the loss of catalytic activity of the CYP2D6 enzyme. Thus, a possible new allele(s) responsible for the PM phenotype was analysed. The results indicated that the PM possessed a new 9-base insertion in exon 9, designated CYP2D6(J9). The CYP2D6(J9) and CYP2D6(D) alleles were clarified to be inherited from the mother [2D6(W)/2D6(J9)] and the father [2D6(W)/2D6(D)], respectively. The 9-base insertion caused a large increase in the apparent K(m) value for bufuralol 1'-hydroxylation as examined by expression of the enzyme protein in yeast. Four of 300 Japanese carried a heterozygous CYP2D6(J9) allele (0.7%, 4/600 chromosomes) as determined by a polymerase chain reaction analysis.

Publication types

  • Case Reports
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles
  • Asian People / genetics*
  • Blotting, Southern
  • Cytochrome P-450 CYP2D6 / biosynthesis
  • Cytochrome P-450 CYP2D6 / genetics*
  • Cytochrome P-450 Enzyme System
  • Exons / genetics
  • Gene Frequency
  • Genotype
  • Heterozygote
  • Humans
  • Japan
  • Mixed Function Oxygenases
  • Mutagenesis, Insertional
  • Mutation*
  • Polymorphism, Restriction Fragment Length
  • Recombinant Proteins / biosynthesis
  • Saccharomyces cerevisiae / genetics
  • Sequence Analysis, DNA
  • Sparteine / metabolism*
  • Sparteine / urine

Substances

  • Recombinant Proteins
  • Sparteine
  • Cytochrome P-450 Enzyme System
  • Mixed Function Oxygenases
  • Cytochrome P-450 CYP2D6
  • bufuralol 1'-hydroxylase