DNA analysis and diagnostics on oligonucleotide microchips.
…, V Barsky, A Belgovskiy, E Kirillov… - Proceedings of the …, 1996 - National Acad Sciences
We present a further development in the technology of sequencing by hybridization to
oligonucleotide microchips (SHOM) and its application to diagnostics for genetic diseases. A robot …
oligonucleotide microchips (SHOM) and its application to diagnostics for genetic diseases. A robot …
Pathway mapping tools for analysis of high content data
S Ekins, Y Nikolsky, A Bugrim, E Kirillov… - High content screening …, 2006 - Springer
The complexity of human biology requires a systems approach that uses computational
approaches to integrate different data types. Systems biology encompasses the complete …
approaches to integrate different data types. Systems biology encompasses the complete …
A combined approach to drug metabolism and toxicity assessment
S Ekins, S Andreyev, A Ryabov, E Kirillov… - Drug Metabolism and …, 2006 - ASPET
The challenge of predicting the metabolism or toxicity of a drug in humans has been
approached using in vivo animal models, in vitro systems, high throughput genomics and …
approached using in vivo animal models, in vitro systems, high throughput genomics and …
Modeling of human cytochrome P450-mediated drug metabolism using unsupervised machine learning approach
…, KV Balakin, Y Nikolsky, E Kirillov… - Journal of medicinal …, 2003 - ACS Publications
We developed a computational algorithm for evaluating the possibility of cytochrome P450-mediated
metabolic transformations that xenobiotics molecules undergo in the human body. …
metabolic transformations that xenobiotics molecules undergo in the human body. …
Functional analysis of OMICs data and small molecule compounds in an integrated “knowledge-based” platform
Y Nikolsky, E Kirillov, R Zuev, E Rakhmatulin… - Protein networks and …, 2009 - Springer
Abstract Analysis of microarray, SNPs, proteomics, and other high-throughput (OMICs) data
is challenging because of its biological complexity and high level of technical and biological …
is challenging because of its biological complexity and high level of technical and biological …
Computational prediction of human drug metabolism
S Ekins, S Andreyev, A Ryabov, E Kirillov… - Expert Opinion on …, 2005 - Taylor & Francis
There is an urgent requirement within the pharmaceutical and biotechnology industries,
regulatory authorities and academia to improve the success of molecules that are selected for …
regulatory authorities and academia to improve the success of molecules that are selected for …
Polymorphism analysis and gene detection by minisequencing on an array of gel-immobilized primers
S Dubiley, E Kirillov, A Mirzabekov - Nucleic Acids Research, 1999 - academic.oup.com
Two procedures, multibase and multiprimer, have been developed for single nucleotide
extension of primers immobilized within polyacrylamide gel pads on a microchip. In the …
extension of primers immobilized within polyacrylamide gel pads on a microchip. In the …
DNA sequencing by hybridization to microchip octa-and decanucleotides extended by stacked pentanucleotides
S Parinov, V Barsky, G Yershov, E Kirillov… - Nucleic acids …, 1996 - academic.oup.com
The efficiency of sequencing by hybridization to an oligonucleotide microchip grows with an
increase in the number and in the length of the oligonucleotides; however, such increases …
increase in the number and in the length of the oligonucleotides; however, such increases …
Fractionation, phosphorylation and ligation on oligonucleotide microchips to enhance sequencing by hybridization
S Dubiley, E Kirillov, Y Lysov… - Nucleic acids …, 1997 - academic.oup.com
Oligonucleotide microchips are manufactured by immobilizing presynthesized oligonucleotides
within 0.1 × 0.1 × 0.02 mm or 1 × 1 × 0.02 mm polyacrylamide gel pads arranged on the …
within 0.1 × 0.1 × 0.02 mm or 1 × 1 × 0.02 mm polyacrylamide gel pads arranged on the …
[HTML][HTML] Bimodal gene expression patterns in breast cancer
M Bessarabova, E Kirillov, W Shi, A Bugrim, Y Nikolsky… - BMC genomics, 2010 - Springer
We identified a set of genes with an unexpected bimodal distribution among breast cancer
patients in multiple studies. The property of bimodality seems to be common, as these genes …
patients in multiple studies. The property of bimodality seems to be common, as these genes …