Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes
Among available genome relatedness indices, average nucleotide identity (ANI) is one of
the most robust measurements of genomic relatedness between strains, and has great …
the most robust measurements of genomic relatedness between strains, and has great …
BRCA1 and BRCA2: different roles in a common pathway of genome protection
R Roy, J Chun, SN Powell - Nature Reviews Cancer, 2012 - nature.com
The proteins encoded by the two major breast cancer susceptibility genes, BRCA1 and
BRCA2, work in a common pathway of genome protection. However, the two proteins work at …
BRCA2, work in a common pathway of genome protection. However, the two proteins work at …
LPA receptors: subtypes and biological actions
…, ST Teo, KE Park, AN Mosley, J Chun - Annual review of …, 2010 - annualreviews.org
… decreased survival in pure (C57Bl/6J or Balb/cByJ) genetic backgrounds (J. Chun,
unpublished observations). Survivors have a reduced body size, craniofacial dysmorphism with …
unpublished observations). Survivors have a reduced body size, craniofacial dysmorphism with …
Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species
Despite recent advances in commercially optimized identification systems, bacterial identification
remains a challenging task in many routine microbiological laboratories, especially in …
remains a challenging task in many routine microbiological laboratories, especially in …
Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies
… Kim M, Oh HS, Park SC, Chun J. Towards a taxonomic coherence between average nucleotide
identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes. …
identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes. …
EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
J Chun, JH Lee, Y Jung, M Kim… - … of systematic and …, 2007 - microbiologyresearch.org
16S rRNA gene sequences have been widely used for the identification of prokaryotes.
However, the flood of sequences of non-type strains and the lack of a peer-reviewed database …
However, the flood of sequences of non-type strains and the lack of a peer-reviewed database …
A large-scale evaluation of algorithms to calculate average nucleotide identity
Average nucleotide identity (ANI) is a category of computational analysis that can be used
to define species boundaries of Archaea and Bacteria. Calculating ANI usually involves the …
to define species boundaries of Archaea and Bacteria. Calculating ANI usually involves the …
[HTML][HTML] Comparative cellular analysis of motor cortex in human, marmoset and mouse
The primary motor cortex (M1) is essential for voluntary fine-motor control and is functionally
conserved across mammals 1 . Here, using high-throughput transcriptomic and epigenomic …
conserved across mammals 1 . Here, using high-throughput transcriptomic and epigenomic …
OrthoANI: an improved algorithm and software for calculating average nucleotide identity
… Kim M., Oh HS, Park SC, Chun J. 2014; Towards a taxonomic coherence between average
nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of …
nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of …
Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
… Kim M, Oh HS, Park SC, Chun J. Towards a taxonomic coherence between average nucleotide
identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes. …
identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes. …