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Drug Metabolism & Disposition

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Research ArticleArticle

The CYP2C19 Intron 2 Branch Point SNP is the Ancestral Polymorphism Contributing to the Poor Metabolizer Phenotype in Livers with CYP2C19*35 and CYP2C19*2 Alleles

Amarjit S Chaudhry, Bhagwat Prasad, Yoshiyuki Shirasaka, Alison Fohner, David Finkelstein, Yiping Fan, Shuoguo Wang, Gang Wu, Eleni Aklillu, Sarah Sim, Kenneth Thummel and Erin G. Schuetz
Drug Metabolism and Disposition May 28, 2015, dmd.115.064428; DOI: https://doi.org/10.1124/dmd.115.064428
Amarjit S Chaudhry
1 St Jude Childrens Research Hospital;
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Bhagwat Prasad
2 University of Washington;
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Yoshiyuki Shirasaka
3 Tokyo University of Pharmacy and Life Sciences;
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Alison Fohner
2 University of Washington;
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David Finkelstein
4 St Jude Children's Research Hospital;
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Yiping Fan
4 St Jude Children's Research Hospital;
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Shuoguo Wang
4 St Jude Children's Research Hospital;
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Gang Wu
4 St Jude Children's Research Hospital;
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Eleni Aklillu
5 Karolinska Institutet;
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Sarah Sim
5 Karolinska Institutet;
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Kenneth Thummel
2 University of Washington;
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Erin G. Schuetz
6 St. Judes Children's Hospital
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  • For correspondence: erin.schuetz@stjude.org
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  • Data Supplement

    Files in this Data Supplement:

    • Supplemental Data -

      Supplemental Table 1 - Primers used for PCR amplification and sequencing of CYP2C19 exons from genomic DNA

      Supplemental Table 2 - Optimized MS/MS parameters of CYP2C19 surrogate peptides used for protein quantification

      Supplemental Table 3 - CYP2C19*2/*35 diplotypes and CYP2C19*2 and CYP2C19*35 allele frequencies in different populations (1000 genome-Phase 3 data)

      Supplemental Table 4 - Full length sequencing of the CYP2C19*35 cDNA

      Supplemental Figure 1 - Visual genotypes of rs12769205 and rs4244285 in populations of African descent (1000 genomes phase 3 data)

      Supplemental Figure 2 - Linkage disequilibrium (LD) map for the common CYP2C19 allelic variants in the YRI population

      Supplemental Figure 3 - CYP2C19 haplotype frequencies, extended haplotype homozygosity, and ancestral tree in other African populations in the 1000 genome project

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Drug Metabolism and Disposition: 50 (5)
Drug Metabolism and Disposition
Vol. 50, Issue 5
1 May 2022
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Research ArticleArticle

The CYP2C19 Intron 2 Branch Point SNP is the Ancestral Polymorphism Contributing to the Poor Metabolizer Phenotype in Livers with CYP2C19*35 and CYP2C19*2 Alleles

Amarjit S Chaudhry, Bhagwat Prasad, Yoshiyuki Shirasaka, Alison Fohner, David Finkelstein, Yiping Fan, Shuoguo Wang, Gang Wu, Eleni Aklillu, Sarah Sim, Kenneth Thummel and Erin G. Schuetz
Drug Metabolism and Disposition May 28, 2015, dmd.115.064428; DOI: https://doi.org/10.1124/dmd.115.064428

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Research ArticleArticle

The CYP2C19 Intron 2 Branch Point SNP is the Ancestral Polymorphism Contributing to the Poor Metabolizer Phenotype in Livers with CYP2C19*35 and CYP2C19*2 Alleles

Amarjit S Chaudhry, Bhagwat Prasad, Yoshiyuki Shirasaka, Alison Fohner, David Finkelstein, Yiping Fan, Shuoguo Wang, Gang Wu, Eleni Aklillu, Sarah Sim, Kenneth Thummel and Erin G. Schuetz
Drug Metabolism and Disposition May 28, 2015, dmd.115.064428; DOI: https://doi.org/10.1124/dmd.115.064428
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