TABLE 3

Allelic frequencies of BCRP variants identified in Koreans a


SNP No.

SNP and Positionb

Position Relative to Transcription Start Site

Location

Effect

N

Allelic Frequency
%
1 -20296A>G -1379 Promoter 92 13
2 -19855C>T -938 Promoter 92 0.5
3 -19605A>G -688 Promoter 92 0.5
4 -19031C>T -114 Promoter 92 1.6
5 -18631C>T +286 5′UTR 92 2.2
6 34G>A Exon 2 V12M 275 23
7 238A>G Intron 2 92 25
8 7430A>G Intron 3 92 9.8
9 8191C>T Exon 4 Q126Stop 375 1.9
10 8825C>A Exon 5 Q141K 275 28
11 21850C>T Exon 7 P269S 674 0.2
12 26297G>A Exon 9 92 1.1
13 38485A>G Intron 11 92 24
14 40086insA Intron 12 92 0.5
15 40110G>T Intron 12 92 22
16 42288C>T Intron 13 92 67.4
17 42313T>G Intron 13 92 2.2
18 44072C>T Intron 13 92 23.4
19 44997A>G Intron 14 92 49.5
20
45235C>T

Intron 15

92
20.1
  • a The reference sequence used has GenBank accession no. AC084732.

  • b Position is indicated with respect to the start codon (ATG) of the BCRP gene; the A in the ATG triplet is designated as +1, and the next base toward the 5′-end is designated as -1.