ReviewStructural plasticity in the human cytosolic sulfotransferase dimer and its role in substrate selectivity and catalysis☆
Introduction
The human body relies on sulfonation as an important metabolic route for regulating the activity and toxicity of small hydrophobic compounds such as steroids, pharmaceutics, and environmental toxicants. This chemical modification is energetically unfavorable, necessitating a family of enzymes, the cytosolic sulfotransferases (SULTs), to catalyze the reaction efficiently. The basic sulfonation reaction involves the transfer of a sulfonate moiety from the universal sulfonate donor, 3′-phosphoadenosine 5′-phosphosulfate (PAPS), to a hydroxyl or primary amine group of a small molecule. Generally, the presence of the highly charged sulfate substituent on the small molecule's scaffold increases the recipient compound's water solubility and alters its target affinity [1], [2]. Thus, sulfation provides an excellent avenue for the homeostatic control of a number of hydrophobic signaling molecules such as oxysterols and steroids like dehydroepiandrosterone (DHEA), which may be preserved as relatively inactive sulfates in the plasma for use by parallel pathways, or until sulfatase activity restores the original compound as illustrated in Fig. 1 [2], [3], [4], [5].
Steroids are not the only compounds regulated by sulfation, as sulfation is also important for the regulation of peptides, vitamins, thyroid hormones, dopamine, and other important biological components [6], [7], [8], [9]. Further, SULTs perform a defensive function in the liver by physically transforming a myriad of dietary chemicals into less harmful chemical species [10], [11]. Together, SULTs and UDP-glucuronosyltransferases catalyze the conjugation of approximately 40% of drugs and carry out a majority of the Phase II conjugation reactions in the body [12]. After conjugation, these metabolites can be rapidly excreted from the body in the urine or feces. This dogmatic route is not always obeyed as sulfation of certain chemicals results in their bioactivation. In the case of minoxidil, the sulfate ester is the bioactive metabolite, which exerts beneficial effects, whereas certain sulfates of hydroxylated heterocyclic amines can form reactive mutagens, which impart deleterious effects [13], [14], [15]. Hundreds, if not thousands, of compounds are sulfated within the human body by the SULTs despite the existence of only 14 identified isoforms. The promiscuity of the SULTs, while having been under investigation for decades, remains difficult to predict even with the aid of quality crystal structures of the individual isoforms. Recent evidence suggests structural dynamics, a property for which crystal structures provide no description, play a key role in the substrate selection mechanism of each SULT [2], [16], [17]. The intention of this review is to summarize our current understanding of the structural plasticity of the SULT dimer as it relates to the substrate specificity and physiological role of each individual isoform. Before discussing the primary topic, we will provide the unfamiliar reader with an abbreviated history of the human SULT isoforms and their enzymatic properties, as this subject matter has been extensively discussed in previous reviews and books [18], [19], [20].
Section snippets
The identification and naming of human SULTs
Sulfated metabolites, specifically conjugated phenols, were first observed in 1851, but the conjugate was not confirmed to be a sulfate until 1876 when Eugen Baumann identified phenol-sulfate in the urine of patients treated with carbolic acid [21], [22]. Though the actual chemical reaction catalyzed by the resident enzymes, SULTs, is now known to be a sulfonation reaction, the misnomer term “sulfation” is deeply embedded in the literature because of the longstanding knowledge of urinary
The heterogeneity amongst the human SULTs
Each SULT isoform has distinguishing features that set it apart from the other isoforms in the superfamily despite their high level of conservation. The classic differentiator of each SULT is its substrate specificity. As one would expect, individual SULT isoforms sharing sequence homology also tend to share similar substrate preferences. Members of the SULT1 family typically have a higher affinity for phenolic compounds compared to members of the SULT2 family, which generally have a higher
The sulfation of drugs in vivo
Sulfation is one of the primary metabolic routes of pharmaceutical agents, therefore SULT activity is important to consider when evaluating the activities of drugs in humans. Unlike glucuronidation, which is considered a low-affinity/high-capacity process, sulfation is a high-affinity/low capacity process that is dependent on cofactor (PAPS) availability [45]. Compared to the concentration of uridine 5′-diphosphoglucuronic acid (UDP-GA) in the liver (200 nmol/g tissue), the liver concentration
The catalytic mechanism of SULTs
The underlying chemistry of SULT catalytic activity has been a topic of debate. The reaction occurs by an in-line attack of the nucleophile (substrate) on the sulfate group of PAPS and is primarily mediated by four residues: His 109, Lys 48, Lys 107, and Ser 135 (hSULT1B1 residue numbering), which are mostly conserved across active human SULTs [69], [70]. Mutation of His 109 abolishes enzyme activity, as the residue has been identified as the catalytic base responsible for deprotonation of the
The kinetic properties of SULTs
Basic enzyme mechanisms must be characterized in order to understand how the enzymes work and how they perform their roles in the body. Dual-substrate enzymes, such as the SULTs, act via one of two primary mechanisms: 1) sequential or 2) non-sequential activity. In the case of a sequential mechanism, both reactants must bind to the enzyme at the same time to form a ternary complex before catalysis occurs and the products are released. Alternatively, non-sequential reactions do not require that
The structure of SULTs
Advancements in X-ray crystallography techniques throughout the 1990s have made the procedure a powerful tool for determining the structure of cytosolic proteins with high resolution (1–2 Å). The first SULT structure (murine SULT1E1) was determined during this advancement period [92]. This isoform served as the base model for the first human SULT structure, 1CJM (hSULT1A3), which was resolved shortly thereafter [93]. Over 35 crystal structures of the various human isoforms have been reported
The contribution of dynamics to SULT activity
Molecular dynamic simulations of hSULT2A1 and hSULT1E1 have provided an atomic level description of the mobility of the SULT structure. The simulation results indicate the mobility of the active site lid (Loop 3) is dependent on the presence of PAPS, as suggested by SULT crystal structures [17], [106], [107]. Further, the presence of the cofactor in the PAPS binding pocket causes the restriction of the active site pore. This result supplements kinetic observations showing hSULT2A1 displays
The contribution of PAPS tissue levels to SULT activity
SULT activity is dependent on the availability of the sulfonate donor, PAPS. PAPS concentration is also responsible for SULT substrate selectivity by regulating the proportion of open/closed SULT in the cell. Based on this principle, our ability to predict the sulfation of compounds in vivo relies on the establishment of a firm understanding of PAPS and SULT concentrations within the cell. The effects of various factors (e.g. sulfur-deficient diet) on rat liver PAPS levels have been assessed
The role of dimerization in SULT activity
Each human SULT isoform has a conserved dimerization domain spanning a 10 residue segment with the consensus sequence KxxxTVxxxE near the C-terminus of the protein [97], [128]. As would be anticipated by the identical dimerization motif exhibited by each isoform, the domain mediates both homo- and heterodimerization, though heterodimerization is rare in vivo [129], [130]. Despite the high level of conservation of SULT dimerization, the biological significance remains unclear [131]. Symmetry is
Conclusion
Structural dynamics play an important role in the regulation of SULT activity. Structural and functional studies have provided data showing the enzymes undergo dynamic shifts upon binding of the cofactor, PAPS. These dynamic shifts provide the SULTs with variable specificity settings by altering the shape and accessibility of the active site. The availability of PAPS within the cell is an important contributing factor to the specificity of each isoform in vivo, yet there is limited information
Acknowledgments
The authors offer thanks to Drs. Melissa Runge–Morris (Wayne State University, Detroit, MI), Thomas S. Leyh, and Ian Cook (Albert Einstein College of Medicine, Bronx, NY) for their aid in drafting this article.
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