3D-QSAR studies with the aid of molecular docking for a series of non-steroidal FXR agonists

Bioorg Med Chem Lett. 2007 Apr 15;17(8):2156-60. doi: 10.1016/j.bmcl.2007.01.079. Epub 2007 Jan 31.

Abstract

The farnesoid x receptor (FXR) has become a potential drug target for treating cholesterol-related and bile acid-related diseases recently. In this paper, 3-dimensional quantitative structure-activity (structure-affinity and structure-efficacy) relationships are investigated for a series of non-steroidal agonists (fexaramine series) by using the comparative molecular field analysis (CoMFA), where molecular docking method (FlexX) is employed to construct molecular superimposition maps. A proposal to design some new agonists is discussed lastly.

MeSH terms

  • Benzene Derivatives / chemistry*
  • Benzene Derivatives / pharmacology
  • Bile Acids and Salts / chemistry
  • Bile Acids and Salts / pharmacology
  • Computer Simulation*
  • DNA-Binding Proteins / agonists*
  • Drug Design
  • Humans
  • Models, Molecular
  • Molecular Structure
  • Protein Binding
  • Quantitative Structure-Activity Relationship*
  • Receptors, Cytoplasmic and Nuclear / agonists*
  • Transcription Factors / agonists*

Substances

  • Benzene Derivatives
  • Bile Acids and Salts
  • DNA-Binding Proteins
  • Receptors, Cytoplasmic and Nuclear
  • Transcription Factors
  • fexaramine
  • farnesoid X-activated receptor