Predicting protein–protein interactions based only on sequences information
J Shen, J Zhang, X Luo, W Zhu, K Yu… - Proceedings of the …, 2007 - National Acad Sciences
Protein–protein interactions (PPIs) are central to most biological processes. Although efforts
have been devoted to the development of methodology for predicting PPIs and protein …
have been devoted to the development of methodology for predicting PPIs and protein …
Prognostic value of C-reactive protein in patients with coronavirus 2019
X Luo, W Zhou, X Yan, T Guo, B Wang… - Clinical Infectious …, 2020 - academic.oup.com
Background An elevated serum C-reactive protein (CRP) level was observed in most patients
with coronavirus disease 2019 (COVID-19). Methods Data for COVID-19 patients with …
with coronavirus disease 2019 (COVID-19). Methods Data for COVID-19 patients with …
Pushing the boundaries of molecular representation for drug discovery with the graph attention mechanism
…, X Liu, F Zhong, X Wan, X Li, Z Li, X Luo… - Journal of medicinal …, 2019 - ACS Publications
Hunting for chemicals with favorable pharmacological, toxicological, and pharmacokinetic
properties remains a formidable challenge for drug discovery. Deep learning provides us with …
properties remains a formidable challenge for drug discovery. Deep learning provides us with …
TarFisDock: a web server for identifying drug targets with docking approach
…, L Kang, H Zhang, K Yang, K Yu, X Luo… - Nucleic acids …, 2006 - academic.oup.com
TarFisDock is a web-based tool for automating the procedure of searching for small
molecule–protein interactions over a large repertoire of protein structures. It offers PDTD (potential …
molecule–protein interactions over a large repertoire of protein structures. It offers PDTD (potential …
TransformerCPI: improving compound–protein interaction prediction by sequence-based deep learning with self-attention mechanism and label reversal experiments
…, X Tan, D Wang, F Zhong, X Liu, T Yang, X Luo… - …, 2020 - academic.oup.com
Motivation Identifying compound–protein interaction (CPI) is a crucial task in drug discovery
and chemogenomics studies, and proteins without three-dimensional structure account for a …
and chemogenomics studies, and proteins without three-dimensional structure account for a …
[HTML][HTML] PDTD: a web-accessible protein database for drug target identification
Background Target identification is important for modern drug discovery. With the advances
in the development of molecular docking, potential binding proteins may be discovered by …
in the development of molecular docking, potential binding proteins may be discovered by …
In silico ADME/T modelling for rational drug design
In recent decades, in silico absorption, distribution, metabolism, excretion (ADME), and toxicity
(T) modelling as a tool for rational drug design has received considerable attention from …
(T) modelling as a tool for rational drug design has received considerable attention from …
Conformational transition of amyloid β-peptide
Y Xu, J Shen, X Luo, W Zhu, K Chen… - Proceedings of the …, 2005 - National Acad Sciences
The amyloid β-peptides (Aβs), containing 39–43 residues, are the key protein components of
amyloid deposits in Alzheimer's disease. To structurally characterize the dynamic behavior …
amyloid deposits in Alzheimer's disease. To structurally characterize the dynamic behavior …
Cinanserin is an inhibitor of the 3C-like proteinase of severe acute respiratory syndrome coronavirus and strongly reduces virus replication in vitro
L Chen, C Gui, X Luo, Q Yang, S Günther… - Journal of …, 2005 - Am Soc Microbiol
The 3C-like proteinase (3CL pro ) of severe acute respiratory syndrome-associated coronavirus
(SARS-CoV) is one of the most promising targets for anti-SARS-CoV drugs due to its …
(SARS-CoV) is one of the most promising targets for anti-SARS-CoV drugs due to its …
Recent advances of collagen-based biomaterials: Multi-hierarchical structure, modification and biomedical applications
X Liu, C Zheng, X Luo, X Wang, H Jiang - Materials Science and …, 2019 - Elsevier
Collagen is the most abundant structural protein of connective tissues including skin, tendon,
bone and cartilage in mammals. The complicated biosynthesis of nature collagen in vivo, …
bone and cartilage in mammals. The complicated biosynthesis of nature collagen in vivo, …