User profiles for Yudong He

Yudong He

Allen Institute for Immunology
Verified email at alleninstitute.org
Cited by 33280

[HTML][HTML] A gene-expression signature as a predictor of survival in breast cancer

MJ Van De Vijver, YD He, LJ Van't Veer… - … England Journal of …, 2002 - Mass Medical Soc
Background A more accurate means of prognostication in breast cancer will improve the
selection of patients for adjuvant systemic therapy. Methods Using microarray analysis to …

Gene expression profiling predicts clinical outcome of breast cancer

LJ Van't Veer, H Dai, MJ Van De Vijver, YD He… - nature, 2002 - nature.com
Breast cancer patients with the same stage of disease can have markedly different treatment
responses and overall outcome. The strongest predictors for metastases (for example, …

[HTML][HTML] Functional discovery via a compendium of expression profiles

…, CD Armour, HA Bennett, E Coffey, H Dai, YD He… - Cell, 2000 - cell.com
Ascertaining the impact of uncharacterized perturbations on the cell is a fundamental problem
in biology. Here, we describe how a single assay can be used to monitor hundreds of …

Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer

…, MR Meyer, S Kobayashi, C Davis, H Dai, YD He… - Nature …, 2001 - nature.com
We describe a flexible system for gene expression profiling using arrays of tens of thousands
of oligonucleotides synthesized in situ by an ink-jet printing method employing standard …

Robustness, scalability, and integration of a wound-response gene expression signature in predicting breast cancer survival

…, R Tibshirani, T Sørlie, H Dai, YD He… - Proceedings of the …, 2005 - National Acad Sciences
Based on the hypothesis that features of the molecular program of normal wound healing
might play an important role in cancer metastasis, we previously identified consistent features …

Signaling and circuitry of multiple MAPK pathways revealed by a matrix of global gene expression profiles

…, R Stoughton, MR Meyer, HA Bennett, YD He… - Science, 2000 - science.org
Genome-wide transcript profiling was used to monitor signal transduction during yeast
pheromone response. Genetic manipulations allowed analysis of changes in gene expression …

Sulfonated graphene for persistent aromatic pollutant management

G Zhao, L Jiang, Y He, J Li, H Dong… - Advanced …, 2011 - Wiley Online Library
Persistent aromatic pollutants are widely found in the effluents from the pharmaceutical,
petrochemical, dyestuff, pesticide, and other industries. Because of their high solubility in water, …

Effects of atmospheric ozone on microarray data quality

TL Fare, EM Coffey, H Dai, YD He, DA Kessler… - Analytical …, 2003 - ACS Publications
A data anomaly was observed that affected the uniformity and reproducibility of fluorescent
signal across DNA microarrays. Results from experimental sets designed to identify potential …

Rosetta error model for gene expression analysis

L Weng, H Dai, Y Zhan, Y He, SB Stepaniants… - …, 2006 - academic.oup.com
Motivation: In microarray gene expression studies, the number of replicated microarrays is
usually small because of cost and sample availability, resulting in unreliable variance …

A cell proliferation signature is a marker of extremely poor outcome in a subpopulation of breast cancer patients

H Dai, L van't Veer, J Lamb, YD He, M Mao, BM Fine… - Cancer research, 2005 - AACR
Breast cancer comprises a group of distinct subtypes that despite having similar histologic
appearances, have very different metastatic potentials. Being able to identify the biological …